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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42716 Canola extracellular 97.6 97.78
CDX69261 Canola extracellular 91.31 93.74
CDX75611 Canola extracellular 93.35 93.35
AT4G37160.1 Thale cress extracellular 91.68 91.68
CDX89586 Canola mitochondrion 32.9 80.18
CDY38959 Canola extracellular 78.56 78.85
KRH04708 Soybean endoplasmic reticulum 66.91 66.54
CDY68876 Canola cytosol 13.31 64.29
KRH57766 Soybean extracellular 22.0 63.3
VIT_00s0253g00050.t01 Wine grape extracellular, mitochondrion 68.58 61.73
CDX89588 Canola cytosol 31.05 61.09
CDX81353 Canola extracellular 59.7 59.7
CDY18626 Canola extracellular 59.52 59.52
CDY01453 Canola extracellular, golgi 59.89 59.45
CDY12788 Canola extracellular 59.33 59.12
CDY43557 Canola extracellular 58.96 58.96
CDY68812 Canola cytosol, peroxisome 47.32 57.4
CDX82897 Canola extracellular 53.97 53.97
CDX73238 Canola extracellular 53.97 53.97
CDX79120 Canola extracellular 53.97 53.97
CDX87633 Canola extracellular 53.97 53.97
CDY67479 Canola extracellular 52.87 52.87
CDY68834 Canola extracellular, vacuole 53.6 52.82
CDY55201 Canola extracellular 53.6 52.82
CDY35790 Canola extracellular 52.87 52.77
CDY68850 Canola extracellular 29.21 52.15
CDY31468 Canola extracellular 51.94 51.0
CDY50029 Canola extracellular 50.65 50.74
CDX82541 Canola extracellular, plasma membrane 51.76 50.45
CDY43995 Canola extracellular, plasma membrane 51.76 50.45
CDX75707 Canola extracellular, plasma membrane, vacuole 51.57 50.27
CDY23596 Canola extracellular, plasma membrane 51.57 50.27
CDY49392 Canola extracellular 41.4 50.22
CDY43352 Canola extracellular, plasma membrane 46.58 49.51
CDY43353 Canola extracellular, plasma membrane, vacuole 50.65 49.46
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 50.09 49.36
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 50.09 49.36
CDY24189 Canola extracellular, plasma membrane, vacuole 50.46 49.28
CDX75708 Canola extracellular 50.09 49.18
CDX82540 Canola extracellular 50.09 49.18
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 49.72 48.91
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 49.72 48.73
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 49.72 48.73
CDY54363 Canola extracellular 48.98 48.62
CDX97352 Canola mitochondrion 43.81 48.57
CDY48757 Canola extracellular, plasma membrane, vacuole 49.91 45.38
CDY05676 Canola extracellular, plasma membrane, vacuole 49.91 45.3
CDX97339 Canola plasma membrane 48.98 45.22
CDX90830 Canola extracellular 48.61 44.96
CDY04429 Canola plasma membrane 48.61 44.88
CDY64276 Canola cytosol 50.46 44.46
CDX91548 Canola cytosol 40.48 44.06
CDY13534 Canola extracellular 44.18 43.85
CDY39058 Canola extracellular 43.99 43.67
CDY48940 Canola extracellular 6.28 43.59
CDY32795 Canola cytosol 8.32 43.27
CDY38866 Canola extracellular 46.21 42.73
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 50.46 42.72
CDY46940 Canola plasma membrane 46.95 42.55
CDX91586 Canola extracellular 46.77 42.38
CDY64023 Canola extracellular 45.66 42.22
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 45.84 41.4
CDX89433 Canola plasma membrane 45.47 41.14
CDX99917 Canola plasma membrane 45.1 40.87
CDY29530 Canola plastid 45.47 40.59
CDY16369 Canola mitochondrion 34.2 39.03
CDX76855 Canola cytoskeleton, cytosol, extracellular 17.01 36.95
CDY00478 Canola cytosol 23.29 32.64
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078C6Z4EnsemblPlants:CDX72617ProteinID:CDX72617ProteinID:CDX72617.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00100164001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709
PANTHER:PTHR11709:SF113SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EAE1BFSEG:seg
Description
BnaC07g46390D
Coordinates
chrLK031796:+:2206246..2208746
Molecular Weight (calculated)
60956.2 Da
IEP (calculated)
9.667
GRAVY (calculated)
-0.109
Length
541 amino acids
Sequence
(BLAST)
001: MKQSNLLLCK LFIGTLLFWL GSVLVKAEDP YLFYTWTVTY GTRSPLGVPQ QVILINGQFP GPAIEAVTNN NIVVNLINKL DEPFLITWNG IKQRRTSWQD
101: GVLGTNCPIQ PNSNWTYQFQ LKDQIGTFTY FASTSMHRAS GAFGALNINQ RSVITTPYLT PDGDFTLLVT DWFKLSHKDL QKRLDAGYAL PLPDALLING
201: ASKGLIFTGQ QGKTYKFRVS NVGIATSINF RIQNHTMTLI EVEGAHTLQE SYESLDIHVG QSVTVLVTLK ASVRDYYIVA SSRFTKPILN TTASLRYLGS
301: KNAVSGPLPV GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSYHYGTIPI NRTLVLANAA TMIYGKLRYT VNRISYINPT TPLKLADWYN ISGVFDFKTI
401: LSTPTIGPAH FGTSVFDIEL HEFVEIVFQN DERSIQSWHM DGTSAFLVGF GSGTWNETMR TRYNLVDAVA RHTFQVYPLS WTSILVSLDN KGMWNLRSQI
501: WSRRYLGQEL YVRVWNDEKS LYTEAEPPLN ALYCGLAKRP L
Best Arabidopsis Sequence Match ( AT4G37160.1 )
(BLAST)
001: MKQTNLLVCK LFIGALFWLG SVLVNAEDPY MFYTWTVTYG TRSPLGVPQQ VILINGQFPG PAIEAVTNNN IVVNLINKLD EPFLITWNGV KQRRTSWQDG
101: VLGTNCPIQP NSNWTYQFQL KDQIGTYTYF ASTSLHRASG AFGALNINQR SVITTPYPTP DGDFTLLVSD WFSNMTHKDL RKSLDAGSAL PLPDALLING
201: VSKGLIFTGQ QGKTYKFRVS NVGIATSINF RIQNHTMSLI EVEGAHTLQE SYESLDVHVG QSMTVLVTLK ASVRDYFIVA STRFTKPVLT TTASLRYQGS
301: KNAAYGPLPI GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSFHYGTIPI NRTLVLANAA TLIYGKLRYT VNRISYINPT TPLKLADWYN ISGVFDFKTI
401: ISTPTTGPAH IGTSVIDVEL HEFVEIVFQN DERSIQSWHM DGTSAYAVGY GSGTWNVTMR KRYNLVDAVP RHTFQVYPLS WTTILVSLDN KGMWNLRSQI
501: WSRRYLGQEL YVRVWNDEKS LYTEAEPPLN VLYCGKAKRP L
Arabidopsis Description
sks15Sks15 [Source:UniProtKB/TrEMBL;Acc:A0A178UTS2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.