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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35790 Canola extracellular 99.82 99.63
Bra034943.1-P Field mustard extracellular 99.63 99.45
AT1G41830.1 Thale cress extracellular 96.3 96.13
CDX87633 Canola extracellular 83.55 83.55
CDX73238 Canola extracellular 83.36 83.36
CDY68834 Canola extracellular, vacuole 82.44 81.24
CDY55201 Canola extracellular 82.26 81.06
KRH60965 Soybean nucleus 81.33 80.44
KRH06000 Soybean endoplasmic reticulum 80.04 80.04
KRH51639 Soybean nucleus 80.78 79.89
KRH17495 Soybean nucleus 78.93 78.06
Solyc04g082140.2.1 Tomato extracellular 76.71 76.85
PGSC0003DMT400025805 Potato extracellular 76.34 76.48
VIT_18s0001g00470.t01 Wine grape extracellular 76.34 76.34
Solyc12g094460.1.1 Tomato extracellular 74.86 74.45
PGSC0003DMT400075398 Potato extracellular 74.12 73.71
Solyc12g094470.1.1 Tomato nucleus 70.61 70.35
PGSC0003DMT400075620 Potato extracellular 70.24 69.98
CDY31468 Canola extracellular 69.69 68.42
CDX82897 Canola extracellular 67.84 67.84
CDX79120 Canola extracellular 67.84 67.84
CDY68876 Canola cytosol 12.94 62.5
CDX91548 Canola cytosol 55.27 60.16
CDY64276 Canola cytosol 67.1 59.12
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 67.47 57.12
CDY29530 Canola plastid 63.77 56.93
CDY01453 Canola extracellular, golgi 56.93 56.51
CDY18626 Canola extracellular 56.38 56.38
CDX81353 Canola extracellular 56.01 56.01
CDY68812 Canola cytosol, peroxisome 45.84 55.61
CDY12788 Canola extracellular 55.45 55.25
CDY68850 Canola extracellular 30.87 55.12
CDY43557 Canola extracellular 54.9 54.9
CDY16369 Canola mitochondrion 47.87 54.64
CDX82540 Canola extracellular 54.9 53.9
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 54.9 53.8
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 54.9 53.8
CDX75708 Canola extracellular 54.71 53.72
CDY23596 Canola extracellular, plasma membrane 55.08 53.69
CDX75707 Canola extracellular, plasma membrane, vacuole 55.08 53.69
CDX82541 Canola extracellular, plasma membrane 55.08 53.69
CDY43995 Canola extracellular, plasma membrane 54.9 53.51
CDY24189 Canola extracellular, plasma membrane, vacuole 54.71 53.43
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 54.16 53.27
CDY43353 Canola extracellular, plasma membrane, vacuole 54.53 53.25
CDX69261 Canola extracellular 51.76 53.13
CDY50029 Canola extracellular 52.87 52.96
CDX72617 Canola extracellular 52.87 52.87
CDY43352 Canola extracellular, plasma membrane 49.72 52.85
CDX97352 Canola mitochondrion 47.5 52.66
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 53.42 52.64
CDY42716 Canola extracellular 52.5 52.59
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 53.05 52.28
CDY49392 Canola extracellular 43.07 52.24
CDY38959 Canola extracellular 51.57 51.76
CDX75611 Canola extracellular 51.76 51.76
CDY54363 Canola extracellular 51.57 51.19
CDX89586 Canola mitochondrion 20.52 50.0
KRH57767 Soybean cytosol, peroxisome 32.53 49.16
CDY13534 Canola extracellular 46.58 46.24
CDY39058 Canola extracellular 46.4 46.05
CDY05676 Canola extracellular, plasma membrane, vacuole 49.91 45.3
CDY48757 Canola extracellular, plasma membrane, vacuole 49.72 45.21
CDY04429 Canola plasma membrane 48.8 45.05
CDX97339 Canola plasma membrane 48.8 45.05
CDX90830 Canola extracellular 48.43 44.79
CDY64023 Canola extracellular 48.06 44.44
CDY38866 Canola extracellular 47.87 44.27
CDY32795 Canola cytosol 8.5 44.23
CDX91586 Canola extracellular 48.24 43.72
CDY46940 Canola plasma membrane 48.06 43.55
CDX99917 Canola plasma membrane 47.69 43.22
CDX89588 Canola cytosol 21.63 42.55
CDX89433 Canola plasma membrane 46.77 42.31
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.58 42.07
CDY48940 Canola extracellular 5.73 39.74
CDY00478 Canola cytosol 27.36 38.34
CDX76855 Canola cytoskeleton, cytosol, extracellular 15.71 34.14
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078JL16UniProt:A0A078JL16EnsemblPlants:CDY67479ProteinID:CDY67479
ProteinID:CDY67479.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CuRO_3_AO-like
InterPro:CupredoxinGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00063648001InterPro:IPR008972PFAM:PF00394
PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF90SUPFAM:SSF49503SignalP:SignalP-noTM
UniParc:UPI0004EE3305:::::
Description
BnaCnng55180DBnaCnng55180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JL16]
Coordinates
chrLK036152:+:61..6495
Molecular Weight (calculated)
60301.7 Da
IEP (calculated)
9.830
GRAVY (calculated)
-0.258
Length
541 amino acids
Sequence
(BLAST)
001: MAVGRSGGTV LLLCFSFFAL VTAESPYRFF DWNVTYGDIY PLGVRQQGIL INGQFPGPDI HSVTNDNLII NVHNSLDEPF LISWNGVQNR RNSYVDGMYG
101: TTCPIPPRTN YTYILQVKDQ IGSFYYFPSL AFHKAAGGFG GIRILSRPGI PVPFADPAGD YTVLIGDWYK SNHTDLKARL DRGRKLPSPD GILINGRSNG
201: ATLNVEQGKT YRLRISNVGL QNSLNFRIQN HRMKLVEVEG THTMQTMFSS LDVHVGQSYS VLITADQSPR DYYVVASSRF TDKIITTTGI LRYSGSSTSA
301: SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGLIPLIRTI VFGSSAGQIN GKQRYGINSV SFVPADTPLK LADFFKISGV YKINSISDKP
401: TGGGLYLDTS VLQVDYRTFI EIVFENKENI VQSYHLNGYS FWVVGMDGGQ WNTGSRNGYN LRDAVSRSTV QVYPKSWTAI YIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV FTTSTSLRDE YPIPKNSRLC GRAKGRHTRP L
Best Arabidopsis Sequence Match ( AT1G41830.1 )
(BLAST)
001: MMAVGRSGGT ILLFCLSFFA AVTAESPYRF FDWNVTYGDI YPLGVRQQGI LINGQFPGPD IHSVTNDNLI INVHNSLDEP FLISWNGVQN RRNSYVDGMY
101: GTTCPIPPRS NYTYILQVKD QIGSFYYFPS LAFHKAAGGF GGIRILSRPG IPVPFADPAG DYTVLIGDWY KFNHTDLKSR LDRGRKLPSP DGILINGRSN
201: GATLNVEQGK TYRLRISNVG LQDSLNFRIQ NHRMKLVEVE GTHTLQTMFS SLDVHVGQSY SVLITADQSP RDYYVVVSSR FTDKIITTTG VLRYSGSSTP
301: ASGPIPGGPT IQVDWSLNQA RAIRTNLTAS GPRPNPQGSY HYGLIPLIRT IVFGSSAGQI NGKQRYGVNS VSFVPADTPL KLADFFKISG VYKINSISDK
401: PTYGGLYLDT SVLQVDYRTF IEIVFENQED IVQSYHLNGY SFWVVGMDGG QWKTGSRNGY NLRDAVSRST VQVYPKSWTA IYIALDNVGM WNLRSEFWAR
501: QYLGQQLYLR VFTSSTSLRD EYPIPKNSRL CGRARGRHTR PL
Arabidopsis Description
SKS6SKS6 [Source:UniProtKB/TrEMBL;Acc:A0A178W7S3]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.