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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46940 Canola plasma membrane 96.98 96.98
CDX99917 Canola plasma membrane 83.92 83.92
CDY38866 Canola extracellular 80.9 82.56
CDY64023 Canola extracellular 80.9 82.56
AT5G51480.1 Thale cress extracellular, plasma membrane 80.07 80.74
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 77.39 77.13
CDX89433 Canola plasma membrane 77.22 77.09
CDY00478 Canola cytosol 47.74 73.83
KRH56354 Soybean extracellular 66.16 66.84
KRH62611 Soybean nucleus 66.0 66.55
PGSC0003DMT400035984 Potato plasma membrane 66.0 66.44
Solyc03g083900.2.1 Tomato extracellular 65.33 65.88
VIT_16s0022g00680.t01 Wine grape plasma membrane 64.99 65.54
CDX97339 Canola plasma membrane 63.15 64.33
CDY68876 Canola cytosol 12.06 64.29
CDX90830 Canola extracellular 62.98 64.27
CDY04429 Canola plasma membrane 62.81 63.99
CDY48757 Canola extracellular, plasma membrane, vacuole 56.45 56.64
CDY05676 Canola extracellular, plasma membrane, vacuole 55.61 55.7
CDY68850 Canola extracellular 25.63 50.49
CDX87633 Canola extracellular 44.22 48.8
CDX82897 Canola extracellular 44.22 48.8
CDX79120 Canola extracellular 44.22 48.8
CDY55201 Canola extracellular 44.72 48.63
CDX73238 Canola extracellular 44.05 48.61
CDY68834 Canola extracellular, vacuole 44.56 48.45
CDY67479 Canola extracellular 43.72 48.24
CDY35790 Canola extracellular 43.72 48.16
CDX69261 Canola extracellular 41.88 47.44
CDY31468 Canola extracellular 43.72 47.37
CDX75708 Canola extracellular 43.72 47.37
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 43.72 47.28
CDX82540 Canola extracellular 43.55 47.19
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 43.55 47.1
CDY68812 Canola cytosol, peroxisome 35.18 47.09
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 43.22 46.99
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 43.22 46.91
CDY42716 Canola extracellular 42.38 46.85
CDX72617 Canola extracellular 42.38 46.77
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 42.88 46.63
CDX75611 Canola extracellular 41.88 46.21
CDY43353 Canola extracellular, plasma membrane, vacuole 42.88 46.21
CDY38959 Canola extracellular 41.71 46.2
CDY49392 Canola extracellular 34.51 46.19
CDY43352 Canola extracellular, plasma membrane 39.36 46.17
CDY50029 Canola extracellular 41.71 46.11
CDY24189 Canola extracellular, plasma membrane, vacuole 42.71 46.03
CDX75707 Canola extracellular, plasma membrane, vacuole 42.71 45.95
CDY43557 Canola extracellular 41.54 45.84
CDY23596 Canola extracellular, plasma membrane 42.55 45.77
CDX82541 Canola extracellular, plasma membrane 42.55 45.77
CDX81353 Canola extracellular 41.37 45.66
CDY18626 Canola extracellular 41.37 45.66
CDY43995 Canola extracellular, plasma membrane 42.38 45.59
CDX97352 Canola mitochondrion 36.85 45.08
CDY48940 Canola extracellular 5.86 44.87
CDY01453 Canola extracellular, golgi 40.87 44.77
CDY39058 Canola extracellular 40.87 44.77
CDY13534 Canola extracellular 40.7 44.59
CDY12788 Canola extracellular 40.37 44.38
CDY54363 Canola extracellular 40.2 44.04
CDX89586 Canola mitochondrion 16.25 43.69
CDX91548 Canola cytosol 36.18 43.46
CDY64276 Canola cytosol 42.55 41.37
CDX89588 Canola cytosol 18.59 40.36
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 42.21 39.44
CDY29530 Canola plastid 39.36 38.78
CDY16369 Canola mitochondrion 29.82 37.55
CDY32795 Canola cytosol 6.2 35.58
CDX76855 Canola cytoskeleton, cytosol, extracellular 11.39 27.31
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078DQN5EnsemblPlants:CDX91586ProteinID:CDX91586ProteinID:CDX91586.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00152994001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF123SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDD1DC
SEG:seg:::::
Description
BnaC02g15740D
Coordinates
chrLK031868:+:696136..698958
Molecular Weight (calculated)
66610.6 Da
IEP (calculated)
5.608
GRAVY (calculated)
-0.206
Length
597 amino acids
Sequence
(BLAST)
001: MAAAYFFSRF TTFSFLFSLA LLCGFSLAGD PSVSYVFEVS YITASPLGVP QQVIAMNGKF PGPVINATTN YNVDVNVFNR LDEPFLFTWN GIEIRGESWQ
101: DGVLGTNCPI PPNWNFTYSF QVKDQIGSFF YFPSLSLQRA SGGFGPIIIN NRDRIPIPFN EPDGEISFMI GDWYTQNHTA LRGVLDSGEE LGMPDGVLIN
201: GKGPYKYTSS VPDGIHYETI NVDPGKTYRI RVHNVGTSTS LNFRIQNHKM LLVETEGHYN SQTNFTDFDI HVGQSYSFLV TMDQNASTDY YIVASARFVN
301: ETAWQRVTGV GILHYSNSEG QASGPLPVPA TDVSQPWSVM NQQRAIKQNT SASGARPNPQ GSYHYGEINI TGTYILRSMP PTKINGSVRA TLNGISFLNP
401: STPMRLADKH KVNGVYKLDF PERPADNIPP RLESSIINAT YKGFIQIIFQ NNDTKVQSFH IDGYSFYVVA MDFGNWTEDK KGSYNNWDAV SRSTVEVYPG
501: AWTAVLLSLD NAGVWNIRVQ NLDRWYLGQE TYMRIINPEE NGSTEMDQPG NALYCGALKS MQKDQIHSSA TSILNEKLNL VFSLVMVLLA LVPVFFC
Best Arabidopsis Sequence Match ( AT4G25240.2 )
(BLAST)
001: MAATCSLLAS FLLCFALLSA VSFAADPFVS YDFRVSYLTA SPLGVPQQVI AVNGQFPGPL LNATTNYNVV VNVFNHLDEP LLLTWPGIQM RRNSWQDGVL
101: GTNCPIPPRW NFTYQFQVKD QIGSFFYSPS LNFQRASGGF GPIVINNRDI IPIPFPQPDG ELIFIIGDWY TQDHKALRRA LDSGKELGMP DGVLINGKGP
201: YKYNSSVPDG IDYLTFHVEP GKTYRIRVHN VGISTSLNFR IQNHSLLLVE TEGHYTSQAN FTDFDVHVGQ SYSFLVTMDQ DATSDYYIVA SARFVNETVW
301: QRVTGVAILH YSNSKGPVSG PLPVPKTDVS SPWSAMSQPK TIRQNTSASG ARPNPQGSFH YGQINITNTY ILRSLPPTII NGALRATLNG ISFVNPSTPV
401: RLADRNKVKG AYKLDFPDRP FNRPLRLDRS MINATYKGFI QVVFQNNDTK IQSFHVDGYS FFVVGMDFGI WSEDKKGSYN NWDAISRSTI EVYPGGWTAV
501: LISLDNVGVW NIRVENLDRW YLGEETYMRI TNPEEDGKTE MDPPDNVLYC GALKNLQKEQ HHSAATSILN GHLKLMLLMV LLASVFRFC
Arabidopsis Description
SKS1SKS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTC9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.