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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79120 Canola extracellular 99.45 99.45
AT4G22010.1 Thale cress extracellular 93.9 93.9
VIT_10s0116g01610.t01 Wine grape extracellular 75.6 75.74
GSMUA_Achr5P26550_001 Banana cytosol 17.74 73.85
Solyc02g080670.2.1 Tomato nucleus 73.2 72.26
PGSC0003DMT400042483 Potato extracellular 72.64 71.85
CDX73238 Canola extracellular 70.06 70.06
CDX87633 Canola extracellular 70.06 70.06
Os06t0678800-01 Rice extracellular 69.13 69.0
TraesCS2D01G230800.1 Wheat extracellular 69.5 68.99
TraesCS2B01G274800.1 Wheat vacuole 69.5 68.99
Os07t0510900-01 Rice extracellular, peroxisome 59.15 68.97
TraesCS2A01G224600.1 Wheat extracellular 69.32 68.81
EER97278 Sorghum extracellular, golgi 69.5 68.61
Zm00001d014366_P002 Maize extracellular 69.32 68.43
HORVU2Hr1G047260.1 Barley extracellular, golgi, vacuole 69.69 68.42
EER90222 Sorghum extracellular 68.58 67.95
CDY67479 Canola extracellular 67.84 67.84
CDY35790 Canola extracellular 67.84 67.71
CDY55201 Canola extracellular 68.39 67.4
CDY68834 Canola extracellular, vacuole 68.39 67.4
TraesCS7B01G359700.1 Wheat extracellular 67.47 67.34
HORVU7Hr1G105620.1 Barley extracellular 67.28 67.16
TraesCS7D01G447200.1 Wheat extracellular 67.1 66.97
GSMUA_Achr5P26560_001 Banana extracellular 42.7 66.57
TraesCS7A01G459400.1 Wheat extracellular 66.91 66.54
Zm00001d021599_P002 Maize extracellular, plasma membrane, vacuole 68.02 65.95
CDY31468 Canola extracellular 64.51 63.34
CDY68876 Canola cytosol 12.75 61.61
CDY68812 Canola cytosol, peroxisome 49.35 59.87
CDX91548 Canola cytosol 53.79 58.55
CDY18626 Canola extracellular 58.41 58.41
CDX81353 Canola extracellular 58.41 58.41
Os07t0510833-00 Rice extracellular 10.72 58.0
CDY43557 Canola extracellular 57.86 57.86
CDY01453 Canola extracellular, golgi 57.86 57.43
CDY64276 Canola cytosol 64.69 57.0
CDY12788 Canola extracellular 56.19 55.99
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 64.88 54.93
CDX69261 Canola extracellular 53.05 54.46
CDY68850 Canola extracellular 30.5 54.46
CDY42716 Canola extracellular 54.16 54.26
CDY38959 Canola extracellular 53.97 54.17
CDX72617 Canola extracellular 53.97 53.97
CDX75611 Canola extracellular 53.23 53.23
CDX89586 Canola mitochondrion 21.63 52.7
CDY29530 Canola plastid 58.6 52.31
CDY16369 Canola mitochondrion 45.66 52.11
CDX97352 Canola mitochondrion 46.03 51.02
CDY43352 Canola extracellular, plasma membrane 47.69 50.69
CDX75708 Canola extracellular 51.57 50.64
CDX82541 Canola extracellular, plasma membrane 51.94 50.63
CDY50029 Canola extracellular 50.46 50.56
CDX82540 Canola extracellular 51.39 50.45
CDX75707 Canola extracellular, plasma membrane, vacuole 51.76 50.45
CDY23596 Canola extracellular, plasma membrane 51.57 50.27
CDY24189 Canola extracellular, plasma membrane, vacuole 51.39 50.18
CDY43995 Canola extracellular, plasma membrane 51.39 50.09
CDY49392 Canola extracellular 41.22 50.0
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 50.83 50.0
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 51.02 50.0
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 51.02 50.0
CDY43353 Canola extracellular, plasma membrane, vacuole 51.02 49.82
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 50.46 49.73
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 50.09 49.36
CDY54363 Canola extracellular 48.98 48.62
CDY13534 Canola extracellular 47.13 46.79
CDY39058 Canola extracellular 47.13 46.79
CDY32795 Canola cytosol 8.69 45.19
CDX97339 Canola plasma membrane 48.8 45.05
CDX90830 Canola extracellular 48.61 44.96
CDY04429 Canola plasma membrane 48.61 44.88
CDX99917 Canola plasma membrane 48.98 44.39
CDX89588 Canola cytosol 22.55 44.36
CDX91586 Canola extracellular 48.8 44.22
CDY48757 Canola extracellular, plasma membrane, vacuole 48.61 44.2
CDY05676 Canola extracellular, plasma membrane, vacuole 48.43 43.96
CDY64023 Canola extracellular 47.32 43.76
CDY46940 Canola plasma membrane 48.24 43.72
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 48.06 43.41
CDX89433 Canola plasma membrane 47.87 43.31
CDY38866 Canola extracellular 46.77 43.25
CDY48940 Canola extracellular 5.91 41.03
CDY00478 Canola cytosol 27.17 38.08
CDX76855 Canola cytoskeleton, cytosol, extracellular 16.45 35.74
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078D192EnsemblPlants:CDX82897ProteinID:CDX82897ProteinID:CDX82897.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00138274001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709
PANTHER:PTHR11709:SF11SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEBAE4SEG:seg
Description
BnaC01g13470D
Coordinates
chrLK031830:+:1179061..1182806
Molecular Weight (calculated)
60644.4 Da
IEP (calculated)
10.264
GRAVY (calculated)
-0.238
Length
541 amino acids
Sequence
(BLAST)
001: MRDSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA VTNDNIIISV FNYLREPFLI SWNGVQQRKN SYQDGVIGTT
101: CPIPPGKNFT YIIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFPSPDGDFW LLAGDWYKTN HYVLRRLLEA GRNIPFPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGTA TTLNFRIQGH TMKLVEVEGS HTIQNVYTSL DVHLGQSYSV LVTANQAPQD YYIVVSSRFT RKVLTTTSIL HYSNSRRGVS
301: GPAPSGPTLN IASSLFQART IKRNLTASGP RPNPQGSYHY GLIKPARTIM LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTNPP
401: GGNGGYLTTS VMAANFREFI EIVFQNWENS VQSWHISGYS FFVVGMDGGQ WTQGSRSKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRARGRHTRP F
Best Arabidopsis Sequence Match ( AT4G22010.1 )
(BLAST)
001: MRGSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA ITNDNIIISV FNYLKEPFLI SWNGVQQRKN SWQDGVVGTT
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F
Arabidopsis Description
sks4At4g22010 [Source:UniProtKB/TrEMBL;Acc:O65449]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.