CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	93.25	91.58
TraesCS2D01G230800.1	Wheat	extracellular	88.69	89.17
TraesCS2A01G224600.1	Wheat	extracellular	88.5	88.99
TraesCS2B01G274800.1	Wheat	vacuole	87.96	88.44
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	87.04	86.57
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	16.79	74.8
VIT_12s0059g00770.t01	Wine grape	extracellular	72.26	73.2
EER90222	Sorghum	extracellular	72.26	72.53
VIT_10s0116g01610.t01	Wine grape	extracellular	70.99	72.04
Solyc07g052240.2.1	Tomato	nucleus	70.62	71.27
Solyc02g080700.1.1	Tomato	cytosol	12.77	70.71
PGSC0003DMT400074510	Potato	extracellular	69.71	70.61
KRH25361	Soybean	mitochondrion, nucleus	68.98	70.39
KRH56153	Soybean	mitochondrion, nucleus	68.8	70.2
KRH26769	Soybean	endoplasmic reticulum	68.43	69.96
PGSC0003DMT400042483	Potato	extracellular	69.53	69.65
Solyc02g080670.2.1	Tomato	nucleus	69.53	69.53
CDX79120	Canola	extracellular	68.61	69.5
CDX82897	Canola	extracellular	68.61	69.5
KRH02049	Soybean	nucleus	69.53	69.4
KRH51114	Soybean	endoplasmic reticulum	69.16	69.29
Bra013582.1-P	Field mustard	extracellular	68.25	69.13
AT4G22010.1	Thale cress	extracellular	67.7	68.58
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	59.67	68.12
Os07t0510833-00	Rice	extracellular	12.41	68.0
Solyc07g052230.2.1	Tomato	extracellular	66.61	67.97
EES12655	Sorghum	extracellular	64.05	60.73
KRH11453	Soybean	extracellular	50.37	60.53
OQU88350	Sorghum	extracellular	56.75	56.24
EES19711	Sorghum	extracellular	51.09	50.09
EES01652	Sorghum	extracellular, golgi, vacuole	50.37	49.46
EER89036	Sorghum	plasma membrane	49.27	45.76
EER93966	Sorghum	extracellular	49.27	45.08
KXG24449	Sorghum	cytosol, nucleus, vacuole	41.06	44.55
EER92264	Sorghum	extracellular	47.81	44.41
CDX76855	Canola	cytoskeleton, cytosol, extracellular	16.24	35.74

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:C5X9Y2	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	EnsemblPlants:EER97278	ProteinID:EER97278	ProteinID:EER97278.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491	GO:GO:0016722
GO:GO:0030312	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF106	EnsemblPlantsGene:SORBI_3002G314800	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001A834E6	RefSeq:XP_002460757.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:68826560..68835783

Molecular Weight (calculated)

60505.9 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.178

Length

548 amino acids

Sequence
(BLAST)

001: MAGANAGRGA ARVLFSLLGL VLVPLLVAGD DPYRFFTWTV TYGDIYPLGV KQQGILINNQ FPGPQIEAVT NDNLIINVFN KLNEPFLLSW SGLQQRRNSF
101: EDGVAGTTCP IPPGANFTYI MQAKDQIGTY YYFPSLAFHK AAGGFGGIRV LSRPQIPVPF PPPAADYTVL IGDWYKANHT DLRYVLDSGK AIGFPDGLLI
201: NGRSLNGYTF TVQPGRTYRF RITNVGLATS LNIRFQGHTM KLVEVEGSHT MQTTYSSLDV HLGQSYSVLL TADQPGFDYA VVVSTRFTAK IISTTAVLHY
301: TNSAGKAPGS LPGGPTIQID WSLNQARSIR WNLTASGPRP NPQGSYHYGL VPVTRTIRLA NSAAAVNGKQ RYAVNSVSYV SPDTPLKVAD YYKIGGVFSV
401: GTIADSPTYG GAYLQTSVMG ANYRDYVEIV FENNEDEVQS WHIDGYAFWV VGMDGGKWSS ASRQGYNLRD GVSRYTVQVY PRSWTAIYMP LDNVGMWNVR
501: SENWARQYLG QQFYLRVWTP STSLRDEYPI PKNALLCGRA AGRRTRPL

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.