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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
nucleus: 21132161
mitochondrion: 27780359
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH25361 Soybean mitochondrion, nucleus 97.58 97.58
KRH26769 Soybean endoplasmic reticulum 83.8 83.96
VIT_12s0059g00770.t01 Wine grape extracellular 83.05 82.44
Solyc07g052230.2.1 Tomato extracellular 78.21 78.21
PGSC0003DMT400074506 Potato cytosol, extracellular, nucleus 69.83 78.12
Solyc07g052240.2.1 Tomato nucleus 78.77 77.9
PGSC0003DMT400074510 Potato extracellular 77.84 77.26
GSMUA_Achr5P26550_001 Banana cytosol 18.44 76.15
Os06t0678800-01 Rice extracellular 72.63 71.96
TraesCS7B01G359700.1 Wheat extracellular 72.63 71.96
HORVU7Hr1G105620.1 Barley extracellular 72.07 71.4
TraesCS7D01G447200.1 Wheat extracellular 71.69 71.03
TraesCS7A01G459400.1 Wheat extracellular 71.69 70.77
KRH06000 Soybean endoplasmic reticulum 70.76 70.24
GSMUA_Achr5P26560_001 Banana extracellular 45.25 70.03
EER90222 Sorghum extracellular 70.95 69.78
Zm00001d014366_P002 Maize extracellular 70.95 69.53
KRH51114 Soybean endoplasmic reticulum 70.58 69.29
KRH17495 Soybean nucleus 70.58 69.29
TraesCS2A01G224600.1 Wheat extracellular 70.2 69.17
TraesCS2D01G230800.1 Wheat extracellular 70.2 69.17
TraesCS2B01G274800.1 Wheat vacuole 70.02 68.99
EER97278 Sorghum extracellular, golgi 70.2 68.8
KRH02049 Soybean nucleus 70.02 68.49
KRH24127 Soybean nucleus 69.27 68.38
Os07t0510900-01 Rice extracellular, peroxisome 59.03 68.32
KRH60965 Soybean nucleus 69.27 68.01
KRH51639 Soybean nucleus 69.27 68.01
HORVU2Hr1G047260.1 Barley extracellular, golgi, vacuole 69.65 67.88
KRH29100 Soybean nucleus 68.9 67.64
Zm00001d021599_P002 Maize extracellular, plasma membrane, vacuole 69.09 66.49
KRH11453 Soybean extracellular 51.96 61.18
KRH76937 Soybean endoplasmic reticulum 58.1 57.78
KRH28523 Soybean extracellular 57.36 57.36
KRH04707 Soybean endoplasmic reticulum 57.73 57.3
KRH57764 Soybean cytosol, extracellular, plastid 45.25 57.18
Os07t0510833-00 Rice extracellular 10.61 57.0
KRH57766 Soybean extracellular 18.99 54.26
KRH04708 Soybean endoplasmic reticulum 54.38 53.68
KRH31599 Soybean extracellular 54.38 52.9
KRH50513 Soybean vacuole 53.26 52.0
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 52.33 50.91
KRG89471 Soybean mitochondrion 52.33 50.45
KRH57767 Soybean cytosol, peroxisome 31.47 47.21
KRG99235 Soybean mitochondrion 10.43 44.8
KRH57349 Soybean endoplasmic reticulum 49.72 44.72
KRH04081 Soybean extracellular 49.16 44.59
KRH56354 Soybean extracellular 48.98 44.5
KRH38383 Soybean cytosol, extracellular, peroxisome 43.2 44.36
KRH62611 Soybean nucleus 48.42 43.92
KRH18028 Soybean cytosol 25.7 43.81
KRG92132 Soybean extracellular 46.0 41.3
KRH46577 Soybean mitochondrion 48.23 40.66
KRG93978 Soybean extracellular 23.28 40.06
KRH34656 Soybean extracellular 44.69 40.0
KRG92134 Soybean cytosol, endoplasmic reticulum, extracellular 42.64 37.98
Protein Annotations
EntrezGene:100797670Gene3D:2.60.40.420MapMan:50.1.10EMBL:ACUP02004101InterPro:Cu-oxidaseInterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CuRO_3_AO-likeInterPro:CupredoxinEnsemblPlantsGene:GLYMA_06G307100GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0009506GO:GO:0016491GO:GO:0016722
GO:GO:0030312GO:GO:0055114UniProt:I1KFE9InterPro:IPR008972EnsemblPlants:KRH56153ProteinID:KRH56153
ProteinID:KRH56153.1PFAM:PF00394PFAM:PF07731PFAM:PF07732PFscan:PS51257PANTHER:PTHR11709
PANTHER:PTHR11709:SF106SUPFAM:SSF49503SignalP:SignalP-noTMUniParc:UPI000233A77ASEG:seg:
Description
hypothetical protein
Coordinates
chr6:+:49593858..49598853
Molecular Weight (calculated)
60124.0 Da
IEP (calculated)
7.857
GRAVY (calculated)
-0.214
Length
537 amino acids
Sequence
(BLAST)
001: MGCSVRVCCV LFLVLLVACV RGEDPYRFYT WNVTYGDIYP LGVKQQGILI NWQFPGPQIE AVTNDNLIIN VYNSLDEPFL LSWNGVLQRR NSWQDGVYGT
101: NCPILPGHNF TYVLQVKDQI GSYFYYPSLA FHKAAGGYGG FKIASRPGIP VPFPTPAGDF TILAGDWYKR NHTDLRAILD GGSDLPFPDG IIINGRGSNA
201: YTFTVDQGKT YRFRISNVGL TTSINFRIQG HKMTIVEVEG THTLQNVYDS LDVHLGQTYS VLVTADQPPQ DYLIVVTTRF TSQVLNATSI FRYSNSGGGV
301: TGLFPWGPTI QVDWSLNQAR SLRRNLTASG PRPNPQGSYH YGLINTTRTI RLQNSGPVIN GKQRYAVNSV SFIPADTPLK LADYYKIQGV FSLGSIPDYP
401: TGSGGYLQTS VMEADFRGFI EVVFENTEDT VESWHVDGHS FFVVGMDGGQ WSSASRLNYN LRDTVSRSTV QVYPKSWTAI YMPLDNVGMW NVRSENWVHQ
501: YLGQQFYLRV YSPANSWRDE YPIPSNAIRC GKAVGHY
Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.