Factsheet for Zm00001d014366_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 16602704
extracellular: 20408568

msms PMID: 16602704 doi

S Alvarez, JQ Goodger, EL Marsh, S Chen, VS Asirvatham, DP Schachtman

Donald Danforth Plant Science Center, 975 North Warson Road, Saint Louis, Missouri 63132, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90222	Sorghum	extracellular	95.26	95.6
Os06t0678800-01	Rice	extracellular	88.69	89.67
HORVU7Hr1G105620.1	Barley	extracellular	88.32	89.3
TraesCS7B01G359700.1	Wheat	extracellular	87.96	88.93
TraesCS7A01G459400.1	Wheat	extracellular	87.41	88.05
TraesCS7D01G447200.1	Wheat	extracellular	87.04	88.01
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	17.88	79.67
GSMUA_Achr8P15900_001	Banana	extracellular	77.55	78.27
Solyc02g080700.1.1	Tomato	cytosol	13.87	76.77
VIT_12s0059g00770.t01	Wine grape	extracellular	74.64	75.6
Solyc07g052240.2.1	Tomato	nucleus	73.72	74.4
VIT_10s0116g01610.t01	Wine grape	extracellular	73.18	74.26
KRH26769	Soybean	endoplasmic reticulum	71.72	73.32
PGSC0003DMT400074510	Potato	extracellular	72.26	73.2
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	63.5	72.5
Solyc02g080670.2.1	Tomato	nucleus	72.08	72.08
Solyc07g052230.2.1	Tomato	extracellular	70.07	71.51
PGSC0003DMT400042483	Potato	extracellular	71.35	71.48
KRH25361	Soybean	mitochondrion, nucleus	69.89	71.32
KRH56153	Soybean	mitochondrion, nucleus	69.53	70.95
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	71.35	70.07
AT4G22010.1	Thale cress	extracellular	68.61	69.5
CDX82897	Canola	extracellular	68.43	69.32
KRH51114	Soybean	endoplasmic reticulum	69.16	69.29
CDX79120	Canola	extracellular	68.25	69.13
KRH02049	Soybean	nucleus	69.16	69.03
Bra013582.1-P	Field mustard	extracellular	67.7	68.58
KRH11453	Soybean	extracellular	50.18	60.31
Zm00001d026132_P001	Maize	vacuole	60.22	57.39
Zm00001d018696_P001	Maize	extracellular	55.66	52.41
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	51.28	50.27
Zm00001d043090_P001	Maize	vacuole	50.91	50.09
Zm00001d012524_P001	Maize	vacuole	50.73	49.73
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	51.09	49.12
Zm00001d045599_P001	Maize	plasma membrane	49.63	45.95
Zm00001d032504_P001	Maize	plasma membrane	49.09	44.39
Zm00001d024595_P001	Maize	extracellular	46.53	42.64
Zm00001d024594_P001	Maize	extracellular, plasma membrane	46.72	42.52
Zm00001d047156_P002	Maize	cytosol	15.51	42.08
Zm00001d029193_P001	Maize	mitochondrion	49.27	39.07
CDX76855	Canola	cytoskeleton, cytosol, extracellular	16.06	35.34
Zm00001d037444_P001	Maize	mitochondrion	16.42	33.58
Zm00001d004806_P001	Maize	plastid	3.83	24.71

Protein Annotations

EntrezGene:100281206	Gene3D:2.60.40.420	MapMan:50.1.10	ProteinID:AQK66054.1	UniProt:B6ST56	EMBL:BT055852
InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	EMBL:EU955921
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF213	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI000182AFD6	EnsemblPlantsGene:Zm00001d014366
EnsemblPlants:Zm00001d014366_P002	EnsemblPlants:Zm00001d014366_T002	SEG:seg	:	:	:

Description

SKU5 similar 4

Coordinates

chr5:+:43072234..43076160

Molecular Weight (calculated)

60685.0 Da

IEP (calculated)

8.928

GRAVY (calculated)

-0.203

Length

548 amino acids

Sequence
(BLAST)

001: MGRRMEAPSS PASLVVVLLL GSLLLQARAD DPYRFYTWNV TFGDIYPLGV KQEGILINGQ FPGPQIDAVT NDNIIVNVFN NLPVPFLLSW QGIQQRRSSW
101: QDGVYGTNCP IPPGGNFTYN MQFKDQIGSY YYFPSLLFHK AAGGYGAIRV LSRPRIPVPF DPPAGDFTIL AGDWFKLNHT DLKGILDSGN DLPFPDGLLI
201: NGQGWNGNRF TVDQGKTYRF RVSNVGIATS VNIRIQGHSM LLVEVEGSHT MQSTYTSIDV HLGQSYSFLV TADQPPADYS IVVSTRFTTP VLTTAAILHY
301: SSSNGAASVP PPPAPTVEID FSLNQARSIR WNLTASGPRP NPQGSYHYGL VNTTRTIRLA NSRATINGKL RYAVNGISFV PADTPLKVAD FYSIPGVFTL
401: GSMPDNPTGG GAYLQTSVMA ANMRDYVEVV FENAENLVQS WHIDGYAFWV VGMDGGQWTP ASRQGYNLRD AIARYTLQVY PQSWTAIYMP LDNVGMWNVR
501: SESWARQYLG QQFYLRVYSP ANSWRDENPI PKNALLCGRA SGRRTRPL

Best Arabidopsis Sequence Match ( AT4G22010.1 )
(BLAST)

001: MRGSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA ITNDNIIISV FNYLKEPFLI SWNGVQQRKN SWQDGVVGTT
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F

Arabidopsis Description

sks4At4g22010 [Source:UniProtKB/TrEMBL;Acc:O65449]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.