Factsheet for Zm00001d032504_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93966	Sorghum	extracellular	89.93	90.98
TraesCS1D01G162800.1	Wheat	extracellular, golgi	83.83	84.67
Os10t0508000-00	Rice	extracellular	46.86	84.52
TraesCS1A01G176000.1	Wheat	plasma membrane	83.0	84.4
TraesCS1B01G204100.1	Wheat	extracellular, plasma membrane	82.84	84.37
HORVU1Hr1G046690.8	Barley	extracellular, plasma membrane	80.86	79.93
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	72.44	73.53
GSMUA_Achr5P19890_001	Banana	plasma membrane	70.46	71.76
Zm00001d045599_P001	Maize	plasma membrane	65.51	67.06
Zm00001d024595_P001	Maize	extracellular	58.91	59.7
Zm00001d024594_P001	Maize	extracellular, plasma membrane	59.08	59.47
Zm00001d029193_P001	Maize	mitochondrion	62.38	54.7
Zm00001d014366_P002	Maize	extracellular	44.39	49.09
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	44.72	48.57
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	42.57	46.15
Zm00001d026132_P001	Maize	vacuole	43.56	45.91
Zm00001d012524_P001	Maize	vacuole	41.91	45.44
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	42.57	45.26
Zm00001d043090_P001	Maize	vacuole	41.42	45.06
Zm00001d018696_P001	Maize	extracellular	42.9	44.67
Zm00001d047156_P002	Maize	cytosol	10.89	32.67
Zm00001d037444_P001	Maize	mitochondrion	12.87	29.1
Zm00001d004806_P001	Maize	plastid	2.97	21.18

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	UniProt:A0A1D6KR63	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	ProteinID:ONM05223.1	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	SignalP:SignalP-noTM
UniParc:UPI0008431268	EnsemblPlantsGene:Zm00001d032504	EnsemblPlants:Zm00001d032504_P001	EnsemblPlants:Zm00001d032504_T001	SEG:seg	:

Description

umc1147Monocopper oxidase-like protein SKU5

Coordinates

chr1:-:228756797..228759565

Molecular Weight (calculated)

66692.8 Da

IEP (calculated)

8.769

GRAVY (calculated)

-0.237

Length

606 amino acids

Sequence
(BLAST)

001: MQRLLALVAA LLVLLASRPA LATDPYAFFD WDVSYVTAAP LGVKQQASIS GPYIPSSFSR PVVNVSTNWN VVVNVLNDLD EPLLITWNGI QHRKNCWQDG
101: VLGTNCPIPP GWNWTYEFQV KDQIGSFFYF PSTGLQRAAG GFGGIVVNNR DVIAVPFARP DGDITIFIGD WYNKNHTDLR KMLDKGKDLG IPDGVLINGK
201: GPYRYNDSLV PPGIEYETFN VHPGRTYRIR VHNVGTSTSL NFRIQGHSMV LVETEGSYTS QQNYTSLDVH VGQSYSFLVA TDQNASSDYY VVASARQVNG
301: SQPLWRRVTG VAVLRYSTSG GPASGALPDP PQDQDDRAFS MNQARSVRWN LSAGAARPNP QGSFRYSAIS VTQAYLLRGA GPVWIGGRRR AALNGLSYAP
401: PETPLRLADA YGVEGVYTLD FPERPPLRGA APRIARSVIN GTYRGFMELI FQNNDTRMQS YHMDGYAFFV VGMDYGEWTE DSRGTYNKGD GVARSTIQVY
501: PGAWAAVLVS LDNVGVWNVR SQNLDSWYLG QEVYVRVVNP EDTGNKTEMA IPANALYCGQ LHKYQKEQTP HHKMGASAAA PRSSVSLARR LLATALLLAG
601: SFVFAP

Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)

001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

Arabidopsis Description

SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.