Factsheet for TraesCS1D01G162800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G176000.1	Wheat	plasma membrane	96.5	97.15
TraesCS1B01G204100.1	Wheat	extracellular, plasma membrane	96.17	96.97
HORVU1Hr1G046690.8	Barley	extracellular, plasma membrane	89.67	87.77
EER93966	Sorghum	extracellular	85.83	85.98
Os10t0508000-00	Rice	extracellular	47.83	85.42
Zm00001d032504_P001	Maize	plasma membrane	84.67	83.83
GSMUA_Achr5P19890_001	Banana	plasma membrane	73.0	73.61
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	73.17	73.53
TraesCS7D01G008600.1	Wheat	golgi	68.33	68.56
TraesCS3D01G086400.1	Wheat	extracellular	62.0	62.31
TraesCS7D01G297700.1	Wheat	extracellular	60.83	61.14
TraesCS7D01G447200.1	Wheat	extracellular	46.17	51.11
TraesCS2D01G230800.1	Wheat	extracellular	45.67	50.28
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	45.17	49.82
TraesCS3D01G171100.1	Wheat	mitochondrion	45.83	49.02
TraesCS2D01G403100.1	Wheat	extracellular	45.33	48.75
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	43.0	46.4
TraesCS1D01G303600.1	Wheat	extracellular	42.0	45.08
TraesCS1D01G295000.2	Wheat	extracellular, mitochondrion, plasma membrane, plastid	14.17	37.95

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1D01G162800
EnsemblPlants:TraesCS1D01G162800.1	TIGR:cd13846	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:233475140..233479737

Molecular Weight (calculated)

66001.9 Da

IEP (calculated)

7.705

GRAVY (calculated)

-0.233

Length

600 amino acids

Sequence
(BLAST)

001: MWRLLALVVS ATVLAAPRPA MAGDPYAFFD WDVSYFTAAP LGVKQQVIGI NGKFPGPVVN ITTNWNVVVN VLNDLDEPLL ITWNGIQHRK NCWQDGVLGT
101: NCPIPSGWNW TYEFQVKDQI GSFFYFPSTG LQRAAGGFGG IVVNNRGVIA VPFGRPDGDI TILIGDWYNR NHTDLRKMLD EGKELGMPDG VLINGKGPYR
201: YNDSLVPAGI EHETIDVHPG RTYRIRVHNV GTSTSLNFRI QGHNLLLVET EGSYTTQQNY TSLDVHVGQS YSFLLTTDQN ASSDYYVVAS ARIVNESLWQ
301: RVTGVAVLRY SNSGGAASGP LPDPPQDQYD KTLSMNQARS VRWNLSAGAA RPNPQGSFRY SSINVTQAYL LRSTTPVEIG GRRRAALNGL SFSPPETPLR
401: LADAYGVEGA YTLDFPERPP PDAAPRVARS VINGTYRGFM ELIFQNNDTR MQSYHVDGYA VFVVGMDYGE WTEASRGAYN KGDSVARSTV QVYPGAWTAV
501: LVSLDNVGFW NVRSQNLDSW YLGQEVYVRV VNPEDGANKT EMAVPRNALY CGQLHKYQKE QTPHHKAAAA ASAAAVRPLA SRRQIVASVM LVVGALVFAS

Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)

001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

Arabidopsis Description

SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.