Factsheet for TraesCS3D01G171100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
extracellular 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G195700.1	Wheat	extracellular	77.9	96.68
TraesCS3A01G170900.1	Wheat	extracellular	91.27	94.12
HORVU3Hr1G033220.2	Barley	extracellular	91.98	92.47
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	54.37	54.86
PGSC0003DMT400025541	Potato	extracellular	40.82	52.05
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	45.63	51.93
Solyc04g081520.1.1	Tomato	extracellular	49.38	51.2
CDY13534	Canola	extracellular	49.2	50.64
CDY39058	Canola	extracellular	49.02	50.46
TraesCS2D01G230800.1	Wheat	extracellular	49.02	50.46
TraesCS2D01G403100.1	Wheat	extracellular	49.73	50.0
AT1G75790.1	Thale cress	extracellular	47.77	49.17
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	46.88	48.35
TraesCS7D01G447200.1	Wheat	extracellular	46.7	48.34
TraesCS7D01G297700.1	Wheat	extracellular	50.09	47.07
TraesCS1D01G162800.1	Wheat	extracellular, golgi	49.02	45.83
TraesCS3D01G086400.1	Wheat	extracellular	48.66	45.73
TraesCS1D01G303600.1	Wheat	extracellular	43.85	44.01
TraesCS7D01G008600.1	Wheat	golgi	46.35	43.48
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	42.42	42.81
TraesCS1D01G295000.2	Wheat	extracellular, mitochondrion, plasma membrane, plastid	13.19	33.04

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF115	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G171100	EnsemblPlants:TraesCS3D01G171100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:150820880..150823384

Molecular Weight (calculated)

62255.3 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.237

Length

561 amino acids

Sequence
(BLAST)

001: MLHLPTTLHH RLPCRGSAMH RGRLVAIVLA GILHSALVAA EDRHVFLNWE VSYSLRSPLG VSKRVIAING RLPGPLLNLT TNDVAHVNVV NTLDEPFLLT
101: WNGLQMRRNS WNDGVAGTNC AIQPGENWTY VFQAKDEIGS FFYRPSLGLH AAAGGHGPIR VNNRPVIDVP FPQPDGEFDV LIGDWYNMDA KEMKELLDRS
201: RGLPPPDGIL INGLGPYEAE VTFKAGRTYR LRVSNVGTRT SLNFRLQGHK LLLVEAEGTY TLQKHYASLD VHPGQSVSVL VAADQAPKAY YMVVSSLFVL
301: PEIFGVATVL YAGSGEQPPS GDAPLDDRSS HTNYNRSMEQ AMSIRMNLTS GAARPNPQGS FHYGDINVTR TLLLQNDESD IGGRRRCTVN GVAFANAGTP
401: LKLADYFRIA GVFKVVSGRP ERRNPFIGTT VIDASYRDYV QIVFENRLPS MQTWHLDGHS FFVVGMAWGK WSPDARSTYN LVDAMYRSTV QVYPTSWTAV
501: LVYLDNEGMW NLRSQDVEKR YLGQELYLRV SQGDSGVPDP RDELPMPSNA LLCGRATRLK S

Best Arabidopsis Sequence Match ( AT1G75790.1 )
(BLAST)

001: MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT
101: NCPILPGTNW TYRFQVKDQI GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD AGHSLPNPDG ILFNGRGPEE
201: TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS
301: PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM
401: FPVYPSNKTP TLGTSVVDIH YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY SWTAILIAMD NQGMWNVRSQ
501: KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR CGKVR

Arabidopsis Description

sks18Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.