Factsheet for Solyc04g081520.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 5
extracellular 6
endoplasmic reticulum 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025541	Potato	extracellular	76.71	94.32
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	56.38	61.87
AT1G75790.1	Thale cress	extracellular	59.15	58.72
CDY13534	Canola	extracellular	58.78	58.35
CDY39058	Canola	extracellular	58.78	58.35
GSMUA_Achr4P29540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	56.93	55.4
TraesCS3A01G170900.1	Wheat	extracellular	50.28	50.0
HORVU3Hr1G033220.2	Barley	extracellular	51.2	49.64
TraesCS3D01G171100.1	Wheat	mitochondrion	51.2	49.38
TraesCS3B01G195700.1	Wheat	extracellular	41.22	49.34
Solyc01g111970.2.1	Tomato	extracellular	48.24	48.69
Solyc12g094460.1.1	Tomato	extracellular	46.95	46.69
Solyc07g052230.2.1	Tomato	extracellular	46.21	46.55
Solyc04g082140.2.1	Tomato	extracellular	46.4	46.48
Solyc02g080700.1.1	Tomato	cytosol	8.5	46.46
Solyc05g055490.1.1	Tomato	extracellular	46.77	46.25
Solyc07g052240.2.1	Tomato	nucleus	46.03	45.86
Solyc05g055720.1.1	Tomato	nucleus	7.58	45.56
Solyc12g094470.1.1	Tomato	nucleus	45.66	45.49
Solyc02g080670.2.1	Tomato	nucleus	45.84	45.26
Solyc02g065170.2.1	Tomato	nucleus	44.73	44.9
Solyc02g090360.2.1	Tomato	extracellular	44.36	44.61
Solyc09g055930.2.1	Tomato	extracellular	46.58	43.15
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	43.99	42.73
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	43.44	42.42
Solyc03g063150.2.1	Tomato	unclear	42.51	41.37
Solyc08g079090.2.1	Tomato	extracellular	43.99	40.41
Solyc11g008860.1.1	Tomato	extracellular	41.04	40.0
Solyc03g083900.2.1	Tomato	extracellular	43.07	39.36
Solyc05g055710.2.1	Tomato	extracellular	32.9	39.21
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	43.62	32.24

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016722	GO:GO:0055114	InterPro:IPR008972	UniProt:K4BVN1
PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF115	SUPFAM:SSF49503
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g081520.1	EnsemblPlants:Solyc04g081520.1.1	UniParc:UPI000276606A	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:65469708..65472663

Molecular Weight (calculated)

61757.6 Da

IEP (calculated)

5.809

GRAVY (calculated)

-0.226

Length

541 amino acids

Sequence
(BLAST)

001: MKTNFLFYIF TISTFVSVHS KLLHFDWVVS ISSNALIGDP KEVIMINNQF PGPLLNTTTN DVVIVNVYNN LTEPFLMTWN GVQLRRNSWQ DGVEGTNCPI
101: MPGKNWTYKF QMKDQIGSFF YFPSLFFQKA AGGYGPIRIN NVETVPLPFT RPDYEYDILI GDWYFDEYKD LRISLEDGCK MPFPDAILIN GMRSDQATFE
201: FQPGATYRLR ISNIGLKTTL NFKIQDHEML LVETEGAYTS KKYHQSLDIH VGQSYSVLVT AKNHSYNSSY HMVASSRFIP RKLSGLAIIR YPNFDVEPLV
301: AVYPDEPSQD EFRFSLEQAL SIRTDLLVGA ARRNPQGSYV YGSINISRTL ILQNGEAALD GQNRYTVNGV SFLHPRTPLK LADYFQLSDV FEPGFLPASP
401: VDDVPRLGIS VIDANYHDFV HIVFQNPLDS LQTWHSDGYN FFVVGMGRGK WEVEKMETYN MIDAIYRSTI QVYPYSWTAI LIKLDNQGMW NLRSQDAEKW
501: YLGQELYIKV KGDVNDPSKI SPRDEAPIPA NVIKCGKVAD L

Best Arabidopsis Sequence Match ( AT1G75790.1 )
(BLAST)

001: MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT
101: NCPILPGTNW TYRFQVKDQI GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD AGHSLPNPDG ILFNGRGPEE
201: TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS
301: PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM
401: FPVYPSNKTP TLGTSVVDIH YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY SWTAILIAMD NQGMWNVRSQ
501: KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR CGKVR

Arabidopsis Description

sks18Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.