Factsheet for Solyc08g079090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

extracellular: 22364583
plastid: 26371478
extracellular: 26583031
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	97.62	96.15
KRH04081	Soybean	extracellular	78.61	78.21
VIT_02s0154g00080.t01	Wine grape	extracellular	78.44	78.17
KRH57349	Soybean	endoplasmic reticulum	78.78	77.72
Bra000773.1-P	Field mustard	extracellular	75.55	76.07
CDX90830	Canola	extracellular	75.55	76.07
CDX97339	Canola	plasma membrane	75.55	75.94
Bra018479.1-P	Field mustard	plasma membrane	75.55	75.94
CDY04429	Canola	plasma membrane	75.21	75.6
AT4G12420.2	Thale cress	extracellular, plasma membrane	74.87	75.13
Solyc03g083900.2.1	Tomato	extracellular	65.87	65.54
Solyc09g055930.2.1	Tomato	extracellular	61.12	61.64
Solyc01g111970.2.1	Tomato	extracellular	44.65	49.07
Solyc07g052240.2.1	Tomato	nucleus	45.16	48.99
Solyc02g065170.2.1	Tomato	nucleus	43.97	48.05
Solyc07g052230.2.1	Tomato	extracellular	43.8	48.04
Solyc12g094460.1.1	Tomato	extracellular	44.14	47.79
Solyc04g082140.2.1	Tomato	extracellular	43.63	47.59
Solyc02g090360.2.1	Tomato	extracellular	42.27	46.28
Solyc12g094470.1.1	Tomato	nucleus	42.61	46.22
Solyc02g080670.2.1	Tomato	nucleus	42.95	46.17
Solyc03g063150.2.1	Tomato	unclear	42.61	45.14
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	42.27	44.7
Solyc04g081520.1.1	Tomato	extracellular	40.41	43.99
Solyc11g008860.1.1	Tomato	extracellular	41.43	43.96
Solyc05g055710.2.1	Tomato	extracellular	33.79	43.83
Solyc05g055490.1.1	Tomato	extracellular	40.58	43.69
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	41.09	43.68
Solyc02g080700.1.1	Tomato	cytosol	7.3	43.43
Solyc05g055720.1.1	Tomato	nucleus	5.94	38.89
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	43.97	35.38

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0009653
GO:GO:0009932	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016491
GO:GO:0016722	GO:GO:0030312	GO:GO:0040007	GO:GO:0046658	GO:GO:0048046	GO:GO:0055114
InterPro:IPR008972	UniProt:K4CNR8	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF82	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc08g079090.2	EnsemblPlants:Solyc08g079090.2.1	TMHMM:TMhelix
UniParc:UPI000276B0EB	SEG:seg	:	:	:	:

Description

Monocopper oxidase-like protein SKU5 [Source:Projected from Arabidopsis thaliana (AT4G12420) UniProtKB/Swiss-Prot;Acc:Q9SU40]

Coordinates

chr8:+:62735779..62739784

Molecular Weight (calculated)

66161.6 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.261

Length

589 amino acids

Sequence
(BLAST)

001: MASSTWSCLI TLICIFLFMG LSYAGDPFKF FNFEVSYIDA SPLGVSEQVI AINGKFPGPT LNVTTNDNVV VNVRNKLDEE LLLHWSGVQQ KRSTWQDGLP
101: GTNCPIPPKW NWTYQFQVKD QIGSFFYFPS LHFQRASGGF GGITINNREE IPIPFDFPYG DITIMIGDWY TRNHTSLRST LLAGKDLGKP DGVLINGKGP
201: YRYNDTIVPD GIDYETITVH PGKTYRIRVS NVGISTSLNF RIQNHNLLLA EAEGSYTVQQ NYTSLDIHVG QSYSFLVSMD QNASSDYYIV ASARFVNQSQ
301: WQRVTGVGIL KYTNSKGKAH GPLPEPPQDE FDKTFSMNQA RSIRWNVTAS GARPNPQGSF RYGSINVTEI YVVQNTPPKV VDGKRRTTLN GISFVNPKTP
401: IRLADQYKLK GVYKLDFPTA PLTGPPKMET SIINGTYRGF MEVIFQNNDT KMHTYHMSGY AFFVVGMDFG VWSNNSRGTY NKWDGIARTT TQVFPGAWTA
501: ILVSLDNVGV WNLRTENLDS WFLGQETYIR VVNSEPTNKT ELPMPDNALF CGQLGKLQKP QDISYATSNE SKFSFMIIML VSAILVVFQ

Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)

001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

Arabidopsis Description

SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.