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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68876 Canola cytosol 18.94 76.79
PGSC0003DMT400060352 Potato extracellular 90.97 74.82
HORVU4Hr1G048550.1 Barley cytosol, extracellular 10.13 73.02
CDY49392 Canola extracellular 61.45 62.56
CDY68850 Canola extracellular 40.97 61.39
Solyc03g063150.2.1 Tomato unclear 73.13 59.71
Solyc11g008860.1.1 Tomato extracellular 72.25 59.1
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 66.96 54.87
VIT_00s1309g00010.t01 Wine grape vacuole 66.08 54.55
VIT_00s1643g00010.t01 Wine grape vacuole 66.08 54.55
GSMUA_Achr8P01580_001 Banana extracellular 60.57 53.29
CDY23596 Canola extracellular, plasma membrane 64.76 52.97
AT1G55570.1 Thale cress extracellular, plasma membrane 64.54 52.79
CDY43995 Canola extracellular, plasma membrane 64.54 52.79
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 64.54 52.6
AT3G13390.1 Thale cress extracellular, plasma membrane, vacuole 63.88 52.35
CDX75707 Canola extracellular, plasma membrane, vacuole 63.88 52.25
CDX82541 Canola extracellular, plasma membrane 63.88 52.25
Bra001503.1-P Field mustard extracellular, plasma membrane 63.88 52.25
CDY50029 Canola extracellular 62.11 52.22
KRH50513 Soybean vacuole 63.22 52.18
Bra038001.1-P Field mustard extracellular, vacuole 63.66 52.07
KRH31599 Soybean extracellular 62.78 51.63
GSMUA_Achr5P27810_001 Banana extracellular 59.91 51.61
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 59.47 51.53
Bra039389.1-P Field mustard plasma membrane 58.81 51.35
GSMUA_Achr11P... Banana vacuole 59.25 51.04
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 61.89 50.91
Bra002825.1-P Field mustard extracellular, golgi, vacuole 62.11 50.9
CDY24189 Canola extracellular, plasma membrane, vacuole 62.11 50.9
CDX97352 Canola mitochondrion 54.63 50.82
Bra039388.1-P Field mustard extracellular, plasma membrane, vacuole 61.89 50.72
CDY43353 Canola extracellular, plasma membrane, vacuole 61.67 50.54
CDY54363 Canola extracellular 60.57 50.46
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 61.01 50.46
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 60.57 50.09
KRG89471 Soybean mitochondrion 61.45 50.09
Bra030850.1-P Field mustard plasma membrane 60.35 49.91
AT3G13400.1 Thale cress extracellular, plasma membrane 60.35 49.73
Bra001504.1-P Field mustard extracellular 60.13 49.55
CDX75708 Canola extracellular 60.13 49.55
CDX82540 Canola extracellular 60.13 49.55
Bra034680.1-P Field mustard extracellular, plasma membrane 60.13 49.37
AT1G55560.1 Thale cress extracellular 59.69 49.36
Bra034679.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 59.91 49.28
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 59.91 49.28
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 59.69 49.09
GSMUA_Achr8P09380_001 Banana extracellular 56.61 48.95
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 59.25 48.91
GSMUA_Achr11P... Banana extracellular 56.61 48.58
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 59.47 48.47
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 58.81 47.94
GSMUA_Achr10P... Banana extracellular, golgi 59.25 47.7
GSMUA_AchrUn_... Banana extracellular 55.29 47.63
CDY43352 Canola extracellular, plasma membrane 53.3 47.54
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 58.15 47.48
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 58.15 47.48
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 57.93 47.47
EES01652 Sorghum extracellular, golgi, vacuole 58.15 47.31
Zm00001d012524_P001 Maize vacuole 57.49 46.69
Zm00001d043090_P001 Maize vacuole 57.27 46.68
Os01t0816700-01 Rice plasma membrane 56.39 46.29
EES19711 Sorghum extracellular 56.83 46.15
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 56.61 45.89
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 56.17 45.62
TraesCS1B01G314600.1 Wheat plasma membrane 56.17 45.62
TraesCS1D01G303600.1 Wheat extracellular 56.17 45.62
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 56.17 45.62
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 57.05 45.44
GSMUA_Achr3P09610_001 Banana plastid 60.79 45.17
Solyc01g111970.2.1 Tomato extracellular 52.86 44.78
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 60.35 43.84
Solyc07g052230.2.1 Tomato extracellular 51.32 43.39
Solyc02g080670.2.1 Tomato nucleus 51.98 43.07
Solyc07g052240.2.1 Tomato nucleus 51.1 42.73
Solyc04g082140.2.1 Tomato extracellular 50.66 42.59
Solyc02g065170.2.1 Tomato nucleus 50.22 42.3
Solyc12g094460.1.1 Tomato extracellular 50.44 42.1
Solyc12g094470.1.1 Tomato nucleus 49.34 41.25
Solyc02g090360.2.1 Tomato extracellular 48.46 40.89
Zm00001d047156_P002 Maize cytosol 15.86 35.64
Solyc09g055930.2.1 Tomato extracellular 45.81 35.62
Solyc03g083900.2.1 Tomato extracellular 44.71 34.29
Solyc05g055490.1.1 Tomato extracellular 40.75 33.82
Solyc08g079090.2.1 Tomato extracellular 43.83 33.79
Solyc04g081520.1.1 Tomato extracellular 39.21 32.9
Zm00001d037444_P001 Maize mitochondrion 17.84 30.22
Os05t0485800-00 Rice plasma membrane 44.27 29.52
Bra030849.1-P Field mustard cytosol 10.13 27.88
Zm00001d004806_P001 Maize plastid 4.85 25.88
Solyc11g008030.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 41.63 25.82
Solyc02g080700.1.1 Tomato cytosol 0.22 1.01
Solyc05g055720.1.1 Tomato nucleus 0.0 0.0
Bra002824.1-P Field mustard cytosol 0.0 0.0
CDY32795 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10InterPro:Cu-oxidaseInterPro:Cu-oxidase_3InterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0009506GO:GO:0016722GO:GO:0030312
GO:GO:0055114InterPro:IPR008972UniProt:K4C2P6PFAM:PF00394PFAM:PF07732PFscan:PS51257
PANTHER:PTHR11709PANTHER:PTHR11709:SF27SUPFAM:SSF49503SignalP:SignalP-noTMEnsemblPlantsGene:Solyc05g055710.2EnsemblPlants:Solyc05g055710.2.1
UniParc:UPI0002767251SEG:seg::::
Description
No Description!
Coordinates
chr5:+:65251114..65253060
Molecular Weight (calculated)
50951.9 Da
IEP (calculated)
9.090
GRAVY (calculated)
-0.318
Length
454 amino acids
Sequence
(BLAST)
001: MNKPIVSFVL LLLFSCNLVH GEDPYINYEW KVTYGTLSPL GVPQQVILIN GEFPGPKINC TSNNNIVVNV VNQLDEPFLI TWKGIQQRKN SWQDGTLGTN
101: CPIPPGKNFT YRFQVKDQIG SYYYHPTTAL HRAVGGYGPL TIHSRALIPV PFNPPADDFT VLVSDWYAKT HKTLKGLLDT GRSLGRPDGI VINGKSGKGD
201: GKDAPMFTLV KGKTYRFRFC NVGMKDTINV RFQGHTMKLV EMEGSHTVQN MYEMLDLHLG QCLSVLINAD QNPKDYYLVA TSRFTKESHF ATATLRYVNG
301: VGGAAPLEKK EAPKGWEWSL NQFNSFRWNL TASSARPNPQ GSYHYGQINI TRTIRLVSTD GVVNGKQRYA INGVSHTDPE TPIKLAQYYG VADKVFKYGL
401: CKDEYMPPNG NEVITIAPNV VNVTYRNFVE IIFENHEKSV QSWQLDGFNF FAVA
Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)
001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA
Arabidopsis Description
sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.