Factsheet for VIT_00s1643g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1309g00010.t01	Wine grape	vacuole	100.0	100.0
KRH31599	Soybean	extracellular	73.45	73.19
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	8.36	73.02
Bra001503.1-P	Field mustard	extracellular, plasma membrane	73.09	72.43
CDX82541	Canola	extracellular, plasma membrane	73.09	72.43
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	72.91	72.38
KRH50513	Soybean	vacuole	72.36	72.36
CDY43995	Canola	extracellular, plasma membrane	72.91	72.25
CDY23596	Canola	extracellular, plasma membrane	72.73	72.07
CDX75707	Canola	extracellular, plasma membrane, vacuole	72.73	72.07
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	72.18	71.92
GSMUA_Achr11P...	Banana	vacuole	68.73	71.73
GSMUA_Achr8P01580_001	Banana	extracellular	67.09	71.51
CDY68876	Canola	cytosol	14.55	71.43
AT1G55570.1	Thale cress	extracellular, plasma membrane	71.82	71.17
GSMUA_Achr5P27810_001	Banana	extracellular	68.18	71.16
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	70.91	71.04
Bra030850.1-P	Field mustard	plasma membrane	70.73	70.86
CDX82540	Canola	extracellular	70.91	70.78
KRG89471	Soybean	mitochondrion	71.64	70.74
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	70.55	70.67
CDX75708	Canola	extracellular	70.73	70.6
Bra001504.1-P	Field mustard	extracellular	70.73	70.6
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	71.09	70.58
Solyc03g063150.2.1	Tomato	unclear	71.27	70.5
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	67.09	70.42
CDY24189	Canola	extracellular, plasma membrane, vacuole	70.91	70.4
CDY43353	Canola	extracellular, plasma membrane, vacuole	70.91	70.4
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	71.09	70.32
AT1G55560.1	Thale cress	extracellular	70.18	70.31
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	71.27	70.25
CDY50029	Canola	extracellular	68.91	70.19
CDX97352	Canola	mitochondrion	62.18	70.08
AT3G13400.1	Thale cress	extracellular, plasma membrane	70.18	70.05
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	70.55	70.04
GSMUA_AchrUn_...	Banana	extracellular	67.09	70.02
CDY68850	Canola	extracellular	38.55	69.97
CDY43352	Canola	extracellular, plasma membrane	64.55	69.74
Bra038001.1-P	Field mustard	extracellular, vacuole	70.36	69.73
PGSC0003DMT400016672	Potato	endoplasmic reticulum	70.18	69.68
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	69.64	69.38
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	69.64	69.38
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	69.64	69.38
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	70.18	69.3
CDY49392	Canola	extracellular	56.18	69.28
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	69.27	69.27
GSMUA_Achr8P09380_001	Banana	extracellular	66.0	69.14
Solyc11g008860.1.1	Tomato	extracellular	69.45	68.83
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	69.64	68.76
Bra030849.1-P	Field mustard	cytosol	20.55	68.48
Bra039389.1-P	Field mustard	plasma membrane	64.55	68.27
GSMUA_Achr11P...	Banana	extracellular	65.45	68.05
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	68.55	68.05
CDY54363	Canola	extracellular	67.27	67.89
Solyc05g055720.1.1	Tomato	nucleus	11.09	67.78
Bra034680.1-P	Field mustard	extracellular, plasma membrane	67.82	67.45
PGSC0003DMT400060352	Potato	extracellular	67.45	67.21
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	68.91	66.84
GSMUA_Achr10P...	Banana	extracellular, golgi	67.82	66.13
Solyc05g055710.2.1	Tomato	extracellular	54.55	66.08
Os01t0816700-01	Rice	plasma membrane	65.64	65.28
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	66.0	65.17
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	65.09	64.27
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	65.27	64.22
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	65.27	64.11
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	64.18	63.72
EES19711	Sorghum	extracellular	64.73	63.69
TraesCS1B01G314600.1	Wheat	plasma membrane	64.73	63.69
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	64.36	63.67
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	64.55	63.51
TraesCS1D01G303600.1	Wheat	extracellular	64.55	63.51
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	64.18	63.49
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	65.64	63.33
EES01652	Sorghum	extracellular, golgi, vacuole	62.73	61.83
Zm00001d043090_P001	Maize	vacuole	62.36	61.58
Zm00001d012524_P001	Maize	vacuole	62.55	61.54
Bra002824.1-P	Field mustard	cytosol	11.45	59.43
GSMUA_Achr3P09610_001	Banana	plastid	66.0	59.41
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	66.73	58.72
CDY32795	Canola	cytosol	11.09	58.65
VIT_03s0038g03570.t01	Wine grape	extracellular	55.27	56.09
VIT_12s0059g00770.t01	Wine grape	extracellular	55.09	56.01
VIT_18s0001g00470.t01	Wine grape	extracellular	54.73	55.64
VIT_00s0253g00040.t01	Wine grape	extracellular	54.0	55.41
VIT_10s0116g01610.t01	Wine grape	extracellular	53.82	54.81
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	11.82	52.85
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	53.09	48.59
VIT_02s0154g00080.t01	Wine grape	extracellular	49.82	46.36
VIT_07s0141g00540.t01	Wine grape	extracellular	49.45	45.71
Zm00001d047156_P002	Maize	cytosol	16.36	44.55
VIT_13s0019g05180.t01	Wine grape	cytosol	42.0	44.0
VIT_16s0022g00680.t01	Wine grape	plasma membrane	45.09	41.89
Zm00001d037444_P001	Maize	mitochondrion	19.64	40.3
Os05t0485800-00	Rice	plasma membrane	42.73	34.51
Zm00001d004806_P001	Maize	plastid	4.73	30.59

Protein Annotations

EntrezGene:100854648	wikigene:100854648	EntrezGene:100854827	wikigene:100854827	Gene3D:2.60.40.420	MapMan:50.1.10
EMBL:AM427181	ProteinID:CAN69061	ProteinID:CAN69061.1	ProteinID:CBI18839	ProteinID:CBI18839.3	ProteinID:CBI41110
ProteinID:CBI41110.3	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:CuRO_2_AO-like
InterPro:Cupredoxin	UniProt:D6CGZ8	EMBL:FN595068	EMBL:FN596865	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491	GO:GO:0016722	GO:GO:0030312
GO:GO:0055114	InterPro:IPR008972	EntrezGene:LOC100854648	wikigene:LOC100854648	EntrezGene:LOC100854827	wikigene:LOC100854827
PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF27	SUPFAM:SSF49503
SignalP:SignalP-noTM	UniParc:UPI00015C7470	ArrayExpress:VIT_00s1643g00010	EnsemblPlantsGene:VIT_00s1643g00010	EnsemblPlants:VIT_00s1643g00010.t01	RefSeq:XP_003635547.1
RefSeq:XP_003635599.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:39969685..39971530

Molecular Weight (calculated)

62078.0 Da

IEP (calculated)

8.909

GRAVY (calculated)

-0.329

Length

550 amino acids

Sequence
(BLAST)

001: MGGSRVLLAL LLCLSAGSFL VRGEDPYFFY TWNVTYGTIS PLGVPQQGIL INGEFPGPRI NCSSNNNIVI NVFNNLDEPL LFTWNGIQQR KNSWQDGLPG
101: TNCPIQPGTN FTYRFQVKDQ IGTYFYFPSL GMQRAAGGIG GLRVNSRLLI PVPFDDPEDD YTVLIGDWYK KSHTVLKKKL DSGHSIGRPD GVQINGKSED
201: KDEPLFTMKP GLTYRYRICN VGIKSSLNFR IQGHTMKLVE LEGSHTVQNV YDSLDVHLGQ CYSVLVTANQ DPKDYYMVAS TRFLKQVYTA KRIIRYTNGK
301: GPASPELPEP PSGWIWSLNQ FRSFRWNLTA SAARPNPQGS YHYGFINITR TIKIVNSAST VDGKLRYAIN GVSHTDPTTP PKLAEYFGVV DKVFKYNTMV
401: DDPPPESAEK IVITPNVLNI TFRTFVEIIF ENHEKSIQSW HLNGYSFFAV AMEPGRWNPD KRKNYNLLDA VSRNTIQVYP GSWTAILLTF DNAGLWNLRS
501: ETWERNYLGQ QLYVSVLSPA RSLRDEYNIP DVAELCGIVK GLPKPQPYTI

Best Arabidopsis Sequence Match ( AT3G13390.1 )
(BLAST)

001: MRGVKLLAAC LYLAAAATVV VRAEDPYFHH VWNVTYGTVS PLGVPQQVIL INGQFPGPNV NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTPG
101: TMCPIMPGTN YTYHFQPKDQ IGSYFYYPST AMHRSAGGFG GLRVNSRLLI PVPYADPEDD YTVLIGDWYT KSHTQLKKFL DSGRTLGRPD GILINGKSGK
201: GDGSDAPLFT LKPGKTYRVR ICNVGLKTSL NFRIQNHKLK LVEMEGSHVL QNDYDSLDVH VGQCYGTILT ANQEAKDYYM VASSRFLKSV ITTTGLLRYE
301: GGKGPASSQL PPGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT QGKVDGKLRY ALNGVSHTDP ETPLKLAEYF GVADKVFKYD
401: SITDNPTPEQ IKSIKIVPNV LNITHRTFIE VVFENHEKSV QSWHLDGYSF FAVAVEPGTW TPEKRKNYNL LDAVSRHTVQ VYPKCWAAIL LTFDNCGMWN
501: VRSENSERRY LGQQLYASVL SPEKSLRDEY NMPETSLQCG LVKGTPKPNP YAGA

Arabidopsis Description

sks11L-ascorbate oxidase pectinesterase-like protein pollen-specific protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LJF2]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.