Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23596 | Canola | extracellular, plasma membrane | 94.95 | 94.77 |
| CDY43995 | Canola | extracellular, plasma membrane | 94.58 | 94.41 |
| CDX75707 | Canola | extracellular, plasma membrane, vacuole | 94.4 | 94.23 |
| Bra001503.1-P | Field mustard | extracellular, plasma membrane | 94.4 | 94.23 |
| CDX82541 | Canola | extracellular, plasma membrane | 94.4 | 94.23 |
| CDY43353 | Canola | extracellular, plasma membrane, vacuole | 92.96 | 92.96 |
| Bra039388.1-P | Field mustard | extracellular, plasma membrane, vacuole | 92.78 | 92.78 |
| CDY24189 | Canola | extracellular, plasma membrane, vacuole | 92.24 | 92.24 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 90.43 | 90.27 |
| Bra034680.1-P | Field mustard | extracellular, plasma membrane | 88.99 | 89.15 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 75.81 | 76.22 |
| AT1G55560.1 | Thale cress | extracellular | 74.19 | 74.86 |
| VIT_00s1309g00010.t01 | Wine grape | vacuole | 72.38 | 72.91 |
| VIT_00s1643g00010.t01 | Wine grape | vacuole | 72.38 | 72.91 |
| GSMUA_Achr5P27810_001 | Banana | extracellular | 66.43 | 69.83 |
| GSMUA_Achr8P01580_001 | Banana | extracellular | 64.8 | 69.57 |
| GSMUA_Achr11P... | Banana | vacuole | 66.06 | 69.45 |
| GSMUA_Achr9P04930_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 64.62 | 68.32 |
| PGSC0003DMT400041845 | Potato | extracellular, plasma membrane, vacuole | 68.05 | 67.56 |
| HORVU4Hr1G048550.1 | Barley | cytosol, extracellular | 7.58 | 66.67 |
| GSMUA_Achr8P09380_001 | Banana | extracellular | 62.64 | 66.1 |
| PGSC0003DMT400016672 | Potato | endoplasmic reticulum | 65.88 | 65.88 |
| Solyc01g056310.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 65.88 | 65.88 |
| GSMUA_AchrUn_... | Banana | extracellular | 62.45 | 65.65 |
| PGSC0003DMT400002554 | Potato | endoplasmic reticulum, extracellular, golgi | 65.88 | 65.65 |
| Solyc11g008860.1.1 | Tomato | extracellular | 65.7 | 65.59 |
| Solyc03g063150.2.1 | Tomato | unclear | 65.16 | 64.93 |
| Solyc01g005510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 65.16 | 64.81 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 65.52 | 64.36 |
| PGSC0003DMT400082031 | Potato | extracellular, plasma membrane, vacuole | 64.62 | 64.27 |
| GSMUA_Achr9P16870_001 | Banana | extracellular, plasma membrane, vacuole | 64.44 | 64.09 |
| GSMUA_Achr11P... | Banana | extracellular | 61.19 | 64.08 |
| Solyc05g055710.2.1 | Tomato | extracellular | 52.35 | 63.88 |
| PGSC0003DMT400010905 | Potato | extracellular, plasma membrane | 65.34 | 63.84 |
| PGSC0003DMT400060352 | Potato | extracellular | 63.18 | 63.41 |
| Solyc05g055720.1.1 | Tomato | nucleus | 10.11 | 62.22 |
| HORVU3Hr1G080360.1 | Barley | extracellular, golgi, vacuole | 62.45 | 62.12 |
| TraesCS1B01G314600.1 | Wheat | plasma membrane | 62.64 | 62.08 |
| TraesCS1D01G303600.1 | Wheat | extracellular | 62.64 | 62.08 |
| TraesCS3D01G333700.1 | Wheat | extracellular, golgi, vacuole | 62.27 | 62.05 |
| TraesCS3B01G371800.1 | Wheat | extracellular, golgi, vacuole | 62.09 | 61.87 |
| HORVU1Hr1G069130.1 | Barley | extracellular, golgi, plasma membrane | 62.45 | 61.79 |
| TraesCS3A01G340200.1 | Wheat | extracellular, golgi, vacuole | 61.73 | 61.73 |
| Os01t0816700-01 | Rice | plasma membrane | 61.55 | 61.66 |
| TraesCS1A01G304100.1 | Wheat | extracellular, golgi, plasma membrane | 62.09 | 61.54 |
| EES01652 | Sorghum | extracellular, golgi, vacuole | 61.91 | 61.47 |
| Zm00001d043090_P001 | Maize | vacuole | 61.19 | 60.86 |
| Zm00001d012524_P001 | Maize | vacuole | 61.37 | 60.82 |
| EES19711 | Sorghum | extracellular | 60.83 | 60.29 |
| Zm00001d038521_P001 | Maize | extracellular, plasma membrane, vacuole | 60.47 | 59.93 |
| GSMUA_Achr3P09610_001 | Banana | plastid | 66.06 | 59.9 |
| Zm00001d010630_P003 | Maize | extracellular, golgi, vacuole | 60.83 | 59.12 |
| GSMUA_Achr5P07530_001 | Banana | extracellular, golgi, vacuole | 64.26 | 56.96 |
| AT1G41830.1 | Thale cress | extracellular | 54.51 | 55.72 |
| AT1G76160.1 | Thale cress | extracellular | 54.33 | 55.64 |
| AT1G21860.1 | Thale cress | extracellular | 53.97 | 55.58 |
| AT4G22010.1 | Thale cress | extracellular | 51.81 | 53.05 |
| AT1G21850.1 | Thale cress | extracellular | 52.35 | 52.63 |
| AT2G23630.2 | Thale cress | extracellular | 51.81 | 52.56 |
| AT5G66920.1 | Thale cress | extracellular, plasma membrane, vacuole | 51.26 | 52.01 |
| AT4G37160.1 | Thale cress | extracellular | 49.64 | 50.83 |
| AT4G38420.1 | Thale cress | extracellular | 49.82 | 50.27 |
| AT4G28090.1 | Thale cress | extracellular | 46.39 | 46.98 |
| AT1G75790.1 | Thale cress | extracellular | 44.77 | 45.5 |
| AT4G12420.2 | Thale cress | extracellular, plasma membrane | 47.47 | 44.8 |
| Zm00001d047156_P002 | Maize | cytosol | 16.07 | 44.06 |
| AT4G25240.1 | Thale cress | plasma membrane | 45.85 | 43.12 |
| AT5G51480.1 | Thale cress | extracellular, plasma membrane | 45.85 | 42.91 |
| AT5G48450.1 | Thale cress | extracellular | 47.65 | 42.51 |
| Zm00001d037444_P001 | Maize | mitochondrion | 18.41 | 38.06 |
| Os05t0485800-00 | Rice | plasma membrane | 40.25 | 32.75 |
| Zm00001d004806_P001 | Maize | plastid | 4.51 | 29.41 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | EntrezGene:820539 | UniProt:A0A178V873 | ProteinID:AEE75341.1 | ArrayExpress:AT3G13390 |
| EnsemblPlantsGene:AT3G13390 | RefSeq:AT3G13390 | TAIR:AT3G13390 | RefSeq:AT3G13390-TAIR-G | EnsemblPlants:AT3G13390.1 | TAIR:AT3G13390.1 |
| Unigene:At.39426 | ProteinID:BAB01744.1 | EMBL:BT003958 | EMBL:BT005058 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 |
| InterPro:Cu-oxidase_3 | InterPro:CuRO_2_AO-like | InterPro:CuRO_3_AO-like | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 |
| GO:GO:0055114 | InterPro:IPR008972 | RefSeq:NP_187947.1 | ProteinID:OAP02389.1 | PFAM:PF00394 | PFAM:PF07731 |
| PFAM:PF07732 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11709 |
| PANTHER:PTHR11709:SF27 | UniProt:Q9LJF2 | SUPFAM:SSF49503 | SignalP:SignalP-noTM | UniParc:UPI000000C204 | SEG:seg |
| Symbol:sks11 | : | : | : | : | : |
Description
sks11L-ascorbate oxidase pectinesterase-like protein pollen-specific protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LJF2]
Coordinates
chr3:-:4350936..4353396
Molecular Weight (calculated)
61950.8 Da
IEP (calculated)
9.245
GRAVY (calculated)
-0.375
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGVKLLAAC LYLAAAATVV VRAEDPYFHH VWNVTYGTVS PLGVPQQVIL INGQFPGPNV NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTPG
101: TMCPIMPGTN YTYHFQPKDQ IGSYFYYPST AMHRSAGGFG GLRVNSRLLI PVPYADPEDD YTVLIGDWYT KSHTQLKKFL DSGRTLGRPD GILINGKSGK
201: GDGSDAPLFT LKPGKTYRVR ICNVGLKTSL NFRIQNHKLK LVEMEGSHVL QNDYDSLDVH VGQCYGTILT ANQEAKDYYM VASSRFLKSV ITTTGLLRYE
301: GGKGPASSQL PPGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT QGKVDGKLRY ALNGVSHTDP ETPLKLAEYF GVADKVFKYD
401: SITDNPTPEQ IKSIKIVPNV LNITHRTFIE VVFENHEKSV QSWHLDGYSF FAVAVEPGTW TPEKRKNYNL LDAVSRHTVQ VYPKCWAAIL LTFDNCGMWN
501: VRSENSERRY LGQQLYASVL SPEKSLRDEY NMPETSLQCG LVKGTPKPNP YAGA
101: TMCPIMPGTN YTYHFQPKDQ IGSYFYYPST AMHRSAGGFG GLRVNSRLLI PVPYADPEDD YTVLIGDWYT KSHTQLKKFL DSGRTLGRPD GILINGKSGK
201: GDGSDAPLFT LKPGKTYRVR ICNVGLKTSL NFRIQNHKLK LVEMEGSHVL QNDYDSLDVH VGQCYGTILT ANQEAKDYYM VASSRFLKSV ITTTGLLRYE
301: GGKGPASSQL PPGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT QGKVDGKLRY ALNGVSHTDP ETPLKLAEYF GVADKVFKYD
401: SITDNPTPEQ IKSIKIVPNV LNITHRTFIE VVFENHEKSV QSWHLDGYSF FAVAVEPGTW TPEKRKNYNL LDAVSRHTVQ VYPKCWAAIL LTFDNCGMWN
501: VRSENSERRY LGQQLYASVL SPEKSLRDEY NMPETSLQCG LVKGTPKPNP YAGA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.