Factsheet for PGSC0003DMT400082031

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	96.41	96.41
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	83.84	82.36
PGSC0003DMT400016672	Potato	endoplasmic reticulum	80.97	81.41
CDY68876	Canola	cytosol	14.72	73.21
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	8.08	71.43
VIT_00s1643g00010.t01	Wine grape	vacuole	68.76	69.64
VIT_00s1309g00010.t01	Wine grape	vacuole	68.76	69.64
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	69.3	69.42
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	68.22	68.1
GSMUA_Achr8P01580_001	Banana	extracellular	62.3	67.25
GSMUA_Achr5P27810_001	Banana	extracellular	63.38	66.98
KRG89471	Soybean	mitochondrion	66.97	66.97
KRH50513	Soybean	vacuole	66.07	66.91
GSMUA_Achr11P...	Banana	vacuole	63.2	66.79
KRH31599	Soybean	extracellular	65.89	66.49
PGSC0003DMT400060352	Potato	extracellular	65.53	66.12
CDY23596	Canola	extracellular, plasma membrane	65.53	65.77
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	61.76	65.65
CDY43995	Canola	extracellular, plasma membrane	65.35	65.59
GSMUA_AchrUn_...	Banana	extracellular	61.94	65.46
CDX82541	Canola	extracellular, plasma membrane	65.17	65.41
Bra001503.1-P	Field mustard	extracellular, plasma membrane	64.99	65.23
CDX75707	Canola	extracellular, plasma membrane, vacuole	64.81	65.05
Bra030849.1-P	Field mustard	cytosol	19.21	64.85
CDY50029	Canola	extracellular	62.84	64.81
AT1G55570.1	Thale cress	extracellular, plasma membrane	64.45	64.68
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	64.27	64.62
Bra038001.1-P	Field mustard	extracellular, vacuole	64.27	64.5
CDY24189	Canola	extracellular, plasma membrane, vacuole	63.91	64.26
GSMUA_Achr8P09380_001	Banana	extracellular	60.5	64.19
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	63.02	63.93
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	63.55	63.9
Bra030850.1-P	Field mustard	plasma membrane	62.84	63.75
CDX97352	Canola	mitochondrion	55.83	63.73
CDY43353	Canola	extracellular, plasma membrane, vacuole	63.38	63.72
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	62.66	63.57
AT1G55560.1	Thale cress	extracellular	62.66	63.57
GSMUA_Achr11P...	Banana	extracellular	60.14	63.33
CDY43352	Canola	extracellular, plasma membrane	57.45	62.87
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	62.3	62.86
AT3G13400.1	Thale cress	extracellular, plasma membrane	61.94	62.61
CDX75708	Canola	extracellular	61.94	62.61
GSMUA_Achr10P...	Banana	extracellular, golgi	63.38	62.59
CDY54363	Canola	extracellular	61.22	62.57
Bra001504.1-P	Field mustard	extracellular	61.76	62.43
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	62.3	62.3
CDX82540	Canola	extracellular	61.58	62.25
CDY49392	Canola	extracellular	49.73	62.11
Bra034680.1-P	Field mustard	extracellular, plasma membrane	61.58	62.03
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	61.4	61.96
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.4	61.96
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.4	61.96
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.86	61.64
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	61.58	61.58
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	61.22	61.55
CDY68850	Canola	extracellular	33.39	61.39
Bra039389.1-P	Field mustard	plasma membrane	57.27	61.35
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	60.86	61.19
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	61.04	61.15
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	61.04	61.15
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	61.22	61.0
EES01652	Sorghum	extracellular, golgi, vacuole	61.04	60.93
Zm00001d043090_P001	Maize	vacuole	60.86	60.86
Zm00001d012524_P001	Maize	vacuole	60.86	60.64
Os01t0816700-01	Rice	plasma membrane	60.14	60.58
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	61.4	60.0
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	59.6	59.29
EES19711	Sorghum	extracellular	59.07	58.86
TraesCS1B01G314600.1	Wheat	plasma membrane	58.71	58.5
TraesCS1D01G303600.1	Wheat	extracellular	58.71	58.5
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	58.35	58.14
GSMUA_Achr3P09610_001	Banana	plastid	62.66	57.12
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	62.3	55.52
PGSC0003DMT400048000	Potato	extracellular	50.45	53.83
Bra002824.1-P	Field mustard	cytosol	10.23	53.77
CDY32795	Canola	cytosol	9.87	52.88
PGSC0003DMT400002004	Potato	extracellular	50.09	51.76
PGSC0003DMT400025805	Potato	extracellular	49.73	51.3
PGSC0003DMT400042483	Potato	extracellular	50.27	51.19
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	43.99	51.04
PGSC0003DMT400074510	Potato	extracellular	49.55	51.02
PGSC0003DMT400075398	Potato	extracellular	48.65	49.82
PGSC0003DMT400075620	Potato	extracellular	47.04	48.25
PGSC0003DMT400025973	Potato	extracellular	49.19	48.15
Zm00001d047156_P002	Maize	cytosol	17.06	47.03
PGSC0003DMT400074313	Potato	extracellular	47.94	45.8
PGSC0003DMT400025541	Potato	extracellular	33.75	42.73
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	45.42	42.31
PGSC0003DMT400035984	Potato	plasma membrane	44.34	41.65
Zm00001d037444_P001	Maize	mitochondrion	18.85	39.18
Os05t0485800-00	Rice	plasma membrane	39.86	32.6
Zm00001d004806_P001	Maize	plastid	4.31	28.24

Protein Annotations

EntrezGene:102589681	Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:CuRO_1_AAO-like	InterPro:CuRO_2_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972
UniProt:M1D5I0	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG400032210	PGSC:PGSC0003DMG400032210
EnsemblPlants:PGSC0003DMT400082031	PANTHER:PTHR11709	PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI0002952496
RefSeq:XP_006354116.1	:	:	:	:	:

Description

Ntp201 [Source:PGSC_GENE;Acc:PGSC0003DMG400032210]

Coordinates

chr1:-:1062929..1065071

Molecular Weight (calculated)

62751.7 Da

IEP (calculated)

8.781

GRAVY (calculated)

-0.348

Length

557 amino acids

Sequence
(BLAST)

001: MERTSITVVS LLVCLTFVLV KAEDPYLRFE WNVTYGTIAP LGVPLQGILI NGQLPGPRIN CTSNNNIVVN VFNHLDEPLL LTWNGVQQRK NSWQDGTPGT
101: MCPIMPGTNF TYRFQVKDQI GSFFYFPTTD LHRAAGGFGA INVHSRALIP VPFDNPADDY SVFVGDWYNK GYKSLKKILD GGRTIGRPDG IHINGKSVKV
201: GDKAAEPLYK MEAGKTYRYR FCNVGMRTSV NVRIQGHPMK LVEIEGSHTV QNVYESLDLH VGQCLSVLVT ADQEPKDYYM IVSSRFLKQA ELSSVSIIRY
301: TNGKGPASSD LPAPPPENTK GIAWSMNQFR SFRWNLTASA ARPNPQGSYH YGQINITRTF KIVNSRSEVD GKLRYALNGI SHTDSETPFK LAEYFGATDK
401: VFKYDLMDDE PSTSSDKVTV ASNIKNATFR NFVEIIFENH EKTIQTYHLD GYSFFAVGVE PGKWTPEKRK NYNLVDAINR HSIQVYPNSW AAVMTTLDNA
501: GLWSLRSEMW ERFYLGQQLY FSVLSPARSL RDEYNLPDNH PLCGIVKSMP MPSPYKA

Best Arabidopsis Sequence Match ( AT1G55570.1 )
(BLAST)

001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA

Arabidopsis Description

sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.