Factsheet for Bra001504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82540	Canola	extracellular	99.46	99.46
CDX75708	Canola	extracellular	98.91	98.91
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	95.83	95.65
AT3G13400.1	Thale cress	extracellular, plasma membrane	94.92	94.92
Bra039389.1-P	Field mustard	plasma membrane	89.47	94.81
Bra030850.1-P	Field mustard	plasma membrane	89.29	89.62
Bra030849.1-P	Field mustard	cytosol	23.59	78.79
Bra038001.1-P	Field mustard	extracellular, vacuole	76.04	75.5
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	75.14	74.73
Bra001503.1-P	Field mustard	extracellular, plasma membrane	75.14	74.59
KRH31599	Soybean	extracellular	72.23	72.1
VIT_00s1309g00010.t01	Wine grape	vacuole	70.6	70.73
VIT_00s1643g00010.t01	Wine grape	vacuole	70.6	70.73
GSMUA_Achr11P...	Banana	vacuole	67.33	70.4
Bra034680.1-P	Field mustard	extracellular, plasma membrane	70.24	69.98
GSMUA_Achr5P27810_001	Banana	extracellular	66.79	69.83
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	69.69	69.31
KRG89471	Soybean	mitochondrion	69.87	69.12
GSMUA_Achr8P01580_001	Banana	extracellular	64.61	68.99
KRH50513	Soybean	vacuole	68.6	68.73
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	65.34	68.7
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	68.78	68.66
GSMUA_Achr8P09380_001	Banana	extracellular	64.61	67.81
GSMUA_Achr11P...	Banana	extracellular	64.25	66.92
GSMUA_AchrUn_...	Banana	extracellular	63.88	66.79
Solyc05g055720.1.1	Tomato	nucleus	10.89	66.67
Bra002824.1-P	Field mustard	cytosol	12.52	65.09
GSMUA_Achr10P...	Banana	extracellular, golgi	66.61	65.07
PGSC0003DMT400016672	Potato	endoplasmic reticulum	65.15	64.8
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	65.15	64.57
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	64.79	64.44
Solyc03g063150.2.1	Tomato	unclear	64.79	64.21
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	64.61	63.91
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	64.61	63.8
Solyc11g008860.1.1	Tomato	extracellular	64.07	63.6
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	64.25	62.43
TraesCS1B01G314600.1	Wheat	plasma membrane	62.79	61.9
PGSC0003DMT400060352	Potato	extracellular	61.89	61.78
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	62.43	61.76
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	62.43	61.76
TraesCS1D01G303600.1	Wheat	extracellular	62.61	61.72
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	62.43	61.54
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	62.43	61.43
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	6.9	60.32
Solyc05g055710.2.1	Tomato	extracellular	49.55	60.13
EES19711	Sorghum	extracellular	60.62	59.75
Os01t0816700-01	Rice	plasma membrane	59.89	59.67
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	60.25	59.39
EES01652	Sorghum	extracellular, golgi, vacuole	60.07	59.32
Zm00001d043090_P001	Maize	vacuole	59.53	58.89
Zm00001d012524_P001	Maize	vacuole	59.71	58.86
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	60.8	58.77
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	58.8	58.17
GSMUA_Achr3P09610_001	Banana	plastid	64.43	58.1
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	58.62	58.09
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	58.44	57.91
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	58.08	57.76
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	63.34	55.84
Bra015781.1-P	Field mustard	extracellular	53.72	54.71
Bra034943.1-P	Field mustard	extracellular	53.72	54.61
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	53.36	53.95
Bra036800.1-P	Field mustard	extracellular	52.81	53.79
Bra037137.1-P	Field mustard	extracellular	52.81	53.79
Bra008241.1-P	Field mustard	extracellular	53.36	53.65
Bra025818.1-P	Field mustard	extracellular	52.09	52.09
Bra032154.1-P	Field mustard	extracellular	50.09	51.21
Bra013582.1-P	Field mustard	extracellular	50.09	51.02
Bra017796.1-P	Field mustard	extracellular	49.36	50.37
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	42.11	47.06
Bra022513.1-P	Field mustard	extracellular	46.28	46.45
Bra018479.1-P	Field mustard	plasma membrane	47.73	44.88
Bra000773.1-P	Field mustard	extracellular	47.37	44.62
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	51.18	44.13
Zm00001d047156_P002	Maize	cytosol	16.15	44.06
Bra022551.1-P	Field mustard	plasma membrane	47.73	44.05
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.19	43.7
Bra029171.1-P	Field mustard	extracellular	45.19	42.56
Bra013877.1-P	Field mustard	plasma membrane	45.19	41.71
Bra034914.1-P	Field mustard	extracellular	5.81	41.03
Zm00001d037444_P001	Maize	mitochondrion	19.42	39.93
Zm00001d004806_P001	Maize	plastid	5.26	34.12
Os05t0485800-00	Rice	plasma membrane	39.38	31.86
Bra011721.1-P	Field mustard	mitochondrion, plastid	48.64	22.6

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra001504	EnsemblPlants:Bra001504.1	EnsemblPlants:Bra001504.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_2_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4CBC4	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI0002540881	SEG:seg	:

Description

AT3G13400 (E=6e-308) sks13 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase

Coordinates

chrA03:+:16712583..16715107

Molecular Weight (calculated)

61863.6 Da

IEP (calculated)

9.281

GRAVY (calculated)

-0.295

Length

551 amino acids

Sequence
(BLAST)

001: MQGGKLLTVF VCLVSTVALV NAGDPYFYYT WNVTYGTASP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVAGT
101: SCPIPAGTNY TYHFQPKDQI GSYFYYPSTA LHRFSGGFGG LRVNSRLLIP VPYADPEDDY TVLINDWYTK SHTALKNFLD SGRTLGSPDG VLINGKSGKV
201: GGQDKPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQAAKNYYMV ASTRFLKKEV STVGVMSYEG
301: STVQPSSELP KAPVGWAWSL NQYRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK SVVNGKVRFG FNGVSHVDTE TPLKLAEYFE MSEKVFKYNV
401: IKDEPAAKVT TLTVEPNVLN ITFRTFVEIV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRKNYNLLD AVSRHTVQVY PNSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I

Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)

001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I

Arabidopsis Description

sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.