Factsheet for Bra008241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68834	Canola	extracellular, vacuole	98.36	98.18
Bra015781.1-P	Field mustard	extracellular	91.79	92.98
AT1G76160.1	Thale cress	extracellular	88.14	89.28
KRH60965	Soybean	nucleus	83.21	83.36
KRH06000	Soybean	endoplasmic reticulum	81.75	82.81
KRH51639	Soybean	nucleus	82.3	82.45
Bra034943.1-P	Field mustard	extracellular	81.2	82.1
KRH17495	Soybean	nucleus	81.57	81.72
VIT_18s0001g00470.t01	Wine grape	extracellular	79.56	80.59
PGSC0003DMT400025805	Potato	extracellular	78.28	79.44
Solyc04g082140.2.1	Tomato	extracellular	77.92	79.07
Solyc12g094460.1.1	Tomato	extracellular	74.64	75.18
PGSC0003DMT400075398	Potato	extracellular	73.72	74.26
Solyc12g094470.1.1	Tomato	nucleus	71.35	72.01
PGSC0003DMT400075620	Potato	extracellular	70.99	71.64
Bra025818.1-P	Field mustard	extracellular	70.8	70.42
Bra013582.1-P	Field mustard	extracellular	67.34	68.21
Bra022513.1-P	Field mustard	extracellular	60.77	60.66
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	67.34	57.75
Bra037137.1-P	Field mustard	extracellular	56.2	56.93
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	56.57	56.88
Bra036800.1-P	Field mustard	extracellular	54.74	55.45
Bra017796.1-P	Field mustard	extracellular	52.92	53.7
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.01	53.43
Bra001504.1-P	Field mustard	extracellular	53.65	53.36
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.65	53.26
Bra001503.1-P	Field mustard	extracellular, plasma membrane	53.83	53.15
Bra039389.1-P	Field mustard	plasma membrane	50.37	53.08
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	53.47	52.89
Bra038001.1-P	Field mustard	extracellular, vacuole	53.47	52.79
Bra030850.1-P	Field mustard	plasma membrane	52.55	52.46
Bra032154.1-P	Field mustard	extracellular	51.09	51.95
Bra030849.1-P	Field mustard	cytosol	15.51	51.52
Bra034680.1-P	Field mustard	extracellular, plasma membrane	51.64	51.18
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	44.34	49.29
KRH57767	Soybean	cytosol, peroxisome	32.12	49.16
Bra018479.1-P	Field mustard	plasma membrane	48.54	45.39
Bra000773.1-P	Field mustard	extracellular	48.36	45.3
Bra029171.1-P	Field mustard	extracellular	48.18	45.13
Bra022551.1-P	Field mustard	plasma membrane	48.91	44.89
Bra002824.1-P	Field mustard	cytosol	8.58	44.34
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	47.63	43.87
Bra013877.1-P	Field mustard	plasma membrane	46.53	42.71
Bra034914.1-P	Field mustard	extracellular	5.84	41.03
Bra011721.1-P	Field mustard	mitochondrion, plastid	50.91	23.52

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra008241	EnsemblPlants:Bra008241.1	EnsemblPlants:Bra008241.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4CVJ4	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF90	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002545D4A	SEG:seg

Description

AT1G76160 (E=9e-284) sks5 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase

Coordinates

chrA02:-:14017661..14023104

Molecular Weight (calculated)

60877.1 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.240

Length

548 amino acids

Sequence
(BLAST)

001: MAANASFATA LTIVFSILFT VTAEDPYRFF NWNVTYGDIY PLGVRQQGIL IDGKFPGPDI HSVTNDNLVI NIFNNLDEPF LLSWNGVQQR RNSYVDGVYG
101: TTCPIPPGKN YTYMLQVKDQ IGSFYYFPSL AFHKAAGGFG GIRILSRPRI PVPFPDPAGD YTVLIGDWYK SNHTDLKAKL DSGRKLPLPD GILINGRGTG
201: ATLNVEQGKT YRLRISNVGL QHSLNFRIQN HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQPAH DYYVVVSSRF TSTVLTTTGV LRYSGSSGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVN GKQRYAVNSV SFNPADTPLK LADYFKIDAD YFKIDGVYRV
401: GSVQSQPTGG GIYLDTSVLQ ADYRTFVEIV FENPENIVQT WHLDGYSFWV VGMDGGKWSP DSRNEYNLRD ALARCTVQVY PSSWTAIYIA LDNVGMWNLR
501: SEFWARQYLG QQLYLRVYTT STSLRDEFPI PKNALLCGRA SGRSTRPL

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.