Factsheet for Bra002824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32795	Canola	cytosol	97.17	99.04
Solyc05g055720.1.1	Tomato	nucleus	51.89	61.11
Bra030849.1-P	Field mustard	cytosol	64.15	41.21
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	95.28	18.23
Bra030850.1-P	Field mustard	plasma membrane	66.04	12.75
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	66.04	12.64
Bra001504.1-P	Field mustard	extracellular	65.09	12.52
Bra001503.1-P	Field mustard	extracellular, plasma membrane	65.09	12.43
Bra038001.1-P	Field mustard	extracellular, vacuole	65.09	12.43
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	63.21	12.14
GSMUA_Achr11P...	Banana	extracellular	60.38	12.1
GSMUA_Achr5P27810_001	Banana	extracellular	59.43	11.95
GSMUA_AchrUn_...	Banana	extracellular	59.43	11.95
GSMUA_Achr8P01580_001	Banana	extracellular	57.55	11.82
GSMUA_Achr8P09380_001	Banana	extracellular	58.49	11.81
Bra034680.1-P	Field mustard	extracellular, plasma membrane	61.32	11.75
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	57.55	11.64
GSMUA_Achr11P...	Banana	vacuole	57.55	11.57
VIT_00s1643g00010.t01	Wine grape	vacuole	59.43	11.45
VIT_00s1309g00010.t01	Wine grape	vacuole	59.43	11.45
Zm00001d043090_P001	Maize	vacuole	58.49	11.13
GSMUA_Achr10P...	Banana	extracellular, golgi	58.49	10.99
TraesCS1B01G314600.1	Wheat	plasma membrane	57.55	10.91
TraesCS1D01G303600.1	Wheat	extracellular	57.55	10.91
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	57.55	10.89
Os01t0816700-01	Rice	plasma membrane	56.6	10.85
EES01652	Sorghum	extracellular, golgi, vacuole	56.6	10.75
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	56.6	10.73
PGSC0003DMT400016672	Potato	endoplasmic reticulum	55.66	10.65
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	55.66	10.59
Zm00001d012524_P001	Maize	vacuole	55.66	10.55
EES19711	Sorghum	extracellular	55.66	10.55
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	54.72	10.43
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	54.72	10.43
Solyc03g063150.2.1	Tomato	unclear	54.72	10.43
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	54.72	10.41
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	54.72	10.38
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	53.77	10.29
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	53.77	10.29
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	53.77	10.25
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	53.77	10.23
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	53.77	10.23
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	54.72	10.23
PGSC0003DMT400060352	Potato	extracellular	52.83	10.14
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	52.83	10.04
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	53.77	10.0
GSMUA_Achr3P09610_001	Banana	plastid	57.55	9.98
Solyc11g008860.1.1	Tomato	extracellular	51.89	9.91
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	57.55	9.76
Bra039389.1-P	Field mustard	plasma membrane	47.17	9.62
Bra025818.1-P	Field mustard	extracellular	49.06	9.44
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	42.45	9.13
Bra013582.1-P	Field mustard	extracellular	46.23	9.06
Bra037137.1-P	Field mustard	extracellular	46.23	9.06
Bra036800.1-P	Field mustard	extracellular	46.23	9.06
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	46.23	8.99
Bra015781.1-P	Field mustard	extracellular	45.28	8.87
Bra017796.1-P	Field mustard	extracellular	44.34	8.7
Bra034943.1-P	Field mustard	extracellular	44.34	8.67
Bra008241.1-P	Field mustard	extracellular	44.34	8.58
Bra022513.1-P	Field mustard	extracellular	44.34	8.56
Bra032154.1-P	Field mustard	extracellular	43.4	8.53
Bra018479.1-P	Field mustard	plasma membrane	40.57	7.34
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	43.4	7.2
Bra000773.1-P	Field mustard	extracellular	39.62	7.18
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.74	6.72
Bra022551.1-P	Field mustard	plasma membrane	34.91	6.2
Bra013877.1-P	Field mustard	plasma membrane	34.91	6.2
Bra029171.1-P	Field mustard	extracellular	33.96	6.15
Zm00001d037444_P001	Maize	mitochondrion	13.21	5.22
Zm00001d047156_P002	Maize	cytosol	8.49	4.46
Bra011721.1-P	Field mustard	mitochondrion, plastid	44.34	3.96
Os05t0485800-00	Rice	plasma membrane	16.04	2.5
Zm00001d004806_P001	Maize	plastid	0.0	0.0
Solyc05g055710.2.1	Tomato	extracellular	0.0	0.0
Bra034914.1-P	Field mustard	extracellular	0.0	0.0
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Bra002824.1	EnsemblPlants:Bra002824.1-P	EnsemblPlantsGene:Bra002824	Gene3D:2.60.40.420	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:Cu-oxidase_2	InterPro:Cupredoxin	InterPro:IPR008972	PANTHER:PTHR11709	PANTHER:PTHR11709:SF127	PFAM:PF07731
SUPFAM:SSF49503	UniParc:UPI0002544A18	UniProt:M4CF42	MapMan:35.1	:	:

Description

AT3G13390 (E=1e-039) sks11 | sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase

Coordinates

chrA10:+:7342897..7343217

Molecular Weight (calculated)

12212.8 Da

IEP (calculated)

8.473

GRAVY (calculated)

-0.449

Length

106 amino acids

Sequence
(BLAST)

001: MCVCRVEPGK WTPAKRKNYN LLDAVYRHTI QVYPKCWGAI LLTFDNCGMW NIRSEILEKR YLGQQLYVNV GPPELSQRDE YSFPANGLRC GIIQGLPDPQ
101: PPRDSL

Best Arabidopsis Sequence Match ( AT3G13390.1 )
(BLAST)

001: MRGVKLLAAC LYLAAAATVV VRAEDPYFHH VWNVTYGTVS PLGVPQQVIL INGQFPGPNV NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTPG
101: TMCPIMPGTN YTYHFQPKDQ IGSYFYYPST AMHRSAGGFG GLRVNSRLLI PVPYADPEDD YTVLIGDWYT KSHTQLKKFL DSGRTLGRPD GILINGKSGK
201: GDGSDAPLFT LKPGKTYRVR ICNVGLKTSL NFRIQNHKLK LVEMEGSHVL QNDYDSLDVH VGQCYGTILT ANQEAKDYYM VASSRFLKSV ITTTGLLRYE
301: GGKGPASSQL PPGPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLVNT QGKVDGKLRY ALNGVSHTDP ETPLKLAEYF GVADKVFKYD
401: SITDNPTPEQ IKSIKIVPNV LNITHRTFIE VVFENHEKSV QSWHLDGYSF FAVAVEPGTW TPEKRKNYNL LDAVSRHTVQ VYPKCWAAIL LTFDNCGMWN
501: VRSENSERRY LGQQLYASVL SPEKSLRDEY NMPETSLQCG LVKGTPKPNP YAGA

Arabidopsis Description

sks11L-ascorbate oxidase pectinesterase-like protein pollen-specific protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LJF2]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.