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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G048550.1 Barley cytosol, extracellular 8.93 79.37
EES19711 Sorghum extracellular 76.43 76.57
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 71.07 71.45
GSMUA_Achr8P01580_001 Banana extracellular 62.68 68.02
GSMUA_Achr5P27810_001 Banana extracellular 63.57 67.55
GSMUA_Achr11P... Banana vacuole 63.57 67.55
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 61.79 66.03
GSMUA_Achr10P... Banana extracellular, golgi 65.89 65.43
VIT_00s1643g00010.t01 Wine grape vacuole 64.11 65.27
VIT_00s1309g00010.t01 Wine grape vacuole 64.11 65.27
Solyc05g055720.1.1 Tomato nucleus 10.36 64.44
CDY68876 Canola cytosol 12.86 64.29
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 63.75 64.09
Bra001503.1-P Field mustard extracellular, plasma membrane 62.32 62.88
CDX82541 Canola extracellular, plasma membrane 62.32 62.88
CDY43352 Canola extracellular, plasma membrane 57.14 62.87
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 61.43 62.66
CDX75708 Canola extracellular 61.61 62.61
KRH50513 Soybean vacuole 61.43 62.55
CDX75707 Canola extracellular, plasma membrane, vacuole 61.96 62.52
AT3G13390.1 Thale cress extracellular, plasma membrane, vacuole 61.79 62.45
CDX82540 Canola extracellular 61.43 62.43
Bra001504.1-P Field mustard extracellular 61.43 62.43
Bra030849.1-P Field mustard cytosol 18.39 62.42
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 61.07 62.3
AT3G13400.1 Thale cress extracellular, plasma membrane 61.25 62.25
CDY23596 Canola extracellular, plasma membrane 61.61 62.16
Bra030850.1-P Field mustard plasma membrane 60.89 62.11
CDY43995 Canola extracellular, plasma membrane 61.43 61.98
KRG89471 Soybean mitochondrion 61.61 61.94
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 60.71 61.82
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 60.89 61.78
KRH31599 Soybean extracellular 60.89 61.78
Bra034679.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 60.89 61.78
Bra039389.1-P Field mustard plasma membrane 57.32 61.73
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 60.71 61.59
AT1G55560.1 Thale cress extracellular 60.18 61.38
PGSC0003DMT400016672 Potato endoplasmic reticulum 60.71 61.37
CDY24189 Canola extracellular, plasma membrane, vacuole 60.71 61.37
CDX97352 Canola mitochondrion 53.39 61.27
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 60.36 61.23
Bra039388.1-P Field mustard extracellular, plasma membrane, vacuole 60.54 61.19
CDY43353 Canola extracellular, plasma membrane, vacuole 60.36 61.01
CDY68850 Canola extracellular 32.86 60.73
AT1G55570.1 Thale cress extracellular, plasma membrane 60.18 60.72
Bra002825.1-P Field mustard extracellular, golgi, vacuole 60.0 60.65
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.0 60.65
CDY50029 Canola extracellular 58.39 60.56
CDY49392 Canola extracellular 48.21 60.54
Bra038001.1-P Field mustard extracellular, vacuole 59.82 60.36
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 60.0 60.22
Solyc03g063150.2.1 Tomato unclear 59.64 60.07
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 59.46 59.78
Solyc11g008860.1.1 Tomato extracellular 59.11 59.64
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 59.29 59.6
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 59.11 59.53
PGSC0003DMT400010905 Potato extracellular, plasma membrane 60.0 59.26
Bra034680.1-P Field mustard extracellular, plasma membrane 57.86 58.59
CDY54363 Canola extracellular 56.96 58.53
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 64.46 57.76
CDY32795 Canola cytosol 10.71 57.69
GSMUA_Achr3P09610_001 Banana plastid 62.86 57.61
PGSC0003DMT400060352 Potato extracellular 56.79 57.61
Bra002824.1-P Field mustard cytosol 10.89 57.55
Solyc05g055710.2.1 Tomato extracellular 45.89 56.61
HORVU7Hr1G105620.1 Barley extracellular 50.0 51.66
HORVU2Hr1G047260.1 Barley extracellular, golgi, vacuole 50.18 51.0
HORVU2Hr1G096250.3 Barley extracellular 28.04 50.32
HORVU2Hr1G062590.3 Barley extracellular 47.14 48.89
HORVU3Hr1G033220.2 Barley extracellular 46.07 46.24
HORVU7Hr1G000150.1 Barley extracellular 45.18 42.45
HORVU1Hr1G046690.8 Barley extracellular, plasma membrane 45.71 41.76
Os05t0485800-00 Rice plasma membrane 46.07 37.89
HORVU7Hr1G071750.4 Barley extracellular, vacuole 43.93 36.77
HORVU3Hr1G015510.2 Barley cytosol 22.32 35.01
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10EMBL:AK374798InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3
InterPro:CupredoxinUniProt:F2EF72GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G069130EnsemblPlants:HORVU1Hr1G069130.1
InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF127
SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002008E47SEG:seg:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EF72]
Coordinates
chrchr1H:+:483066115..483068572
Molecular Weight (calculated)
62198.4 Da
IEP (calculated)
8.417
GRAVY (calculated)
-0.184
Length
560 amino acids
Sequence
(BLAST)
001: MATTMTMRRT AAGGVLLVAA LLLLSTRVAR AEDPYVFFEW HVTYGTKNIV GTPQKVILIN GEFPGPRINC SSNNNIMVNV FNQLDQPLLF TWNGIQHRKN
101: SWQDGVPGTN CPVAPGTNYT YHWQPKDQIG TFFYFPSIGM QRAVGGFGLI SVVSRLLIPV PFDPPADDLQ VVIGDWFTKD HAVMASLLDA GRSFGRPAGV
201: LINGKGGKEA TNPPMFTWEA AKTYRLRICN VGIKSSLNFR IQGHDMKLVE IDGSHTLQDS YDSLDVHVGQ CLSVLVDADQ KPADYLMVAS TRFMADASSV
301: SAVVRYAGSN TPPAPNVPEP PAGWAWSLNQ WRSFRWNLTA SAARPNPQGS YHYGQINITR TIKLLVTRGH IDGKLKYGFN GVSHVDADTP LKLAEYFNIS
401: DQVFKYNQMA DTPPAVNGPM HVAPNVITAE FRTFIEVVFE NPEKSMDSVH IDGYAFFAVG MGPGKWTPDQ RKTYNLLDAV SRHTIQVYPR SWSAVMLTFD
501: NAGMWNVRSN LWERHYLGEQ LYMSVVSPAR SLRDEYNMPE NALRCGKVVG LPLPPSYLPA
Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)
001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I
Arabidopsis Description
sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.