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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 99.64 99.64
Bra034679.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 99.46 99.46
CDY43352 Canola extracellular, plasma membrane 90.58 98.23
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 97.46 97.82
CDX82540 Canola extracellular 96.38 96.55
CDX75708 Canola extracellular 96.2 96.37
AT3G13400.1 Thale cress extracellular, plasma membrane 95.47 95.64
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 88.77 89.25
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 88.41 88.89
CDY68876 Canola cytosol 16.3 80.36
CDY43995 Canola extracellular, plasma membrane 75.72 75.32
CDY23596 Canola extracellular, plasma membrane 75.54 75.14
CDY50029 Canola extracellular 73.19 74.81
CDX97352 Canola mitochondrion 66.12 74.8
CDX82541 Canola extracellular, plasma membrane 75.0 74.59
CDY43353 Canola extracellular, plasma membrane, vacuole 74.82 74.55
CDX75707 Canola extracellular, plasma membrane, vacuole 74.64 74.23
CDY24189 Canola extracellular, plasma membrane, vacuole 74.28 74.01
CDY54363 Canola extracellular 71.56 72.48
KRH31599 Soybean extracellular 72.1 72.1
CDY49392 Canola extracellular 56.7 70.18
VIT_00s1309g00010.t01 Wine grape vacuole 69.38 69.64
VIT_00s1643g00010.t01 Wine grape vacuole 69.38 69.64
GSMUA_Achr11P... Banana vacuole 66.3 69.45
CDY68850 Canola extracellular 38.04 69.31
KRG89471 Soybean mitochondrion 69.75 69.12
KRH50513 Soybean vacuole 68.84 69.09
GSMUA_Achr5P27810_001 Banana extracellular 65.94 69.07
GSMUA_Achr8P01580_001 Banana extracellular 64.31 68.8
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 65.04 68.51
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 67.75 67.75
GSMUA_Achr8P09380_001 Banana extracellular 63.77 67.05
GSMUA_Achr11P... Banana extracellular 63.22 65.97
GSMUA_AchrUn_... Banana extracellular 62.68 65.65
GSMUA_Achr10P... Banana extracellular, golgi 66.12 64.72
PGSC0003DMT400016672 Potato endoplasmic reticulum 64.67 64.44
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 64.49 64.26
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 64.31 63.85
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 64.13 63.44
Solyc05g055720.1.1 Tomato nucleus 10.33 63.33
Solyc03g063150.2.1 Tomato unclear 63.59 63.13
Solyc11g008860.1.1 Tomato extracellular 63.41 63.06
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 63.41 62.84
CDY32795 Canola cytosol 11.78 62.5
PGSC0003DMT400010905 Potato extracellular, plasma membrane 63.77 62.08
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 62.14 61.58
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 61.96 61.4
TraesCS1D01G303600.1 Wheat extracellular 61.78 61.0
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 61.59 60.82
TraesCS1B01G314600.1 Wheat plasma membrane 61.59 60.82
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 61.59 60.71
PGSC0003DMT400060352 Potato extracellular 60.69 60.69
Solyc05g055710.2.1 Tomato extracellular 49.09 59.69
Os01t0816700-01 Rice plasma membrane 59.6 59.49
EES19711 Sorghum extracellular 59.78 59.03
EES01652 Sorghum extracellular, golgi, vacuole 59.42 58.78
HORVU4Hr1G048550.1 Barley cytosol, extracellular 6.7 58.73
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 59.24 58.5
Zm00001d043090_P001 Maize vacuole 58.88 58.35
Zm00001d012524_P001 Maize vacuole 58.88 58.14
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 59.96 58.07
HORVU3Hr1G080360.1 Barley extracellular, golgi, vacuole 58.15 57.63
TraesCS3D01G333700.1 Wheat extracellular, golgi, vacuole 57.97 57.55
GSMUA_Achr3P09610_001 Banana plastid 63.59 57.45
TraesCS3B01G371800.1 Wheat extracellular, golgi, vacuole 57.79 57.37
TraesCS3A01G340200.1 Wheat extracellular, golgi, vacuole 57.43 57.22
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 62.32 55.04
CDY35790 Canola extracellular 53.99 54.98
CDY68812 Canola cytosol, peroxisome 44.38 54.93
CDY67479 Canola extracellular 53.8 54.9
CDX73238 Canola extracellular 53.62 54.71
CDX87633 Canola extracellular 53.44 54.53
CDX81353 Canola extracellular 52.9 53.97
CDY18626 Canola extracellular 52.72 53.79
CDY01453 Canola extracellular, golgi 52.9 53.58
CDY43557 Canola extracellular 52.36 53.42
CDY68834 Canola extracellular, vacuole 53.08 53.37
CDY55201 Canola extracellular 52.9 53.19
CDY12788 Canola extracellular 51.99 52.85
CDY31468 Canola extracellular 51.45 51.54
CDX79120 Canola extracellular 50.0 51.02
CDX82897 Canola extracellular 50.0 51.02
CDX69261 Canola extracellular 48.37 50.66
CDY38959 Canola extracellular 49.28 50.46
CDY42716 Canola extracellular 48.73 49.81
CDX72617 Canola extracellular 48.73 49.72
CDX75611 Canola extracellular 48.37 49.35
CDX89586 Canola mitochondrion 18.66 46.4
CDY64276 Canola cytosol 50.91 45.77
CDY13534 Canola extracellular 44.75 45.32
CDY39058 Canola extracellular 44.75 45.32
CDX91548 Canola cytosol 40.76 45.27
CDX97339 Canola plasma membrane 47.1 44.37
CDY04429 Canola plasma membrane 47.1 44.37
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 51.09 44.13
CDY05676 Canola extracellular, plasma membrane, vacuole 47.64 44.13
CDX90830 Canola extracellular 46.74 44.1
CDY46940 Canola plasma membrane 47.64 44.05
CDY48757 Canola extracellular, plasma membrane, vacuole 47.46 44.03
Zm00001d047156_P002 Maize cytosol 15.94 43.56
CDX91586 Canola extracellular 47.1 43.55
CDY38866 Canola extracellular 44.93 42.39
CDY29530 Canola plastid 46.38 42.24
CDY64023 Canola extracellular 44.57 42.05
CDX89588 Canola cytosol 20.83 41.82
CDX89433 Canola plasma membrane 44.93 41.47
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 44.93 41.4
CDX99917 Canola plasma membrane 44.57 41.21
CDY16369 Canola mitochondrion 34.6 40.3
CDY48940 Canola extracellular 5.62 39.74
Zm00001d037444_P001 Maize mitochondrion 19.2 39.55
CDY00478 Canola cytosol 25.72 36.79
Zm00001d004806_P001 Maize plastid 5.07 32.94
Os05t0485800-00 Rice plasma membrane 38.77 31.42
CDX76855 Canola cytoskeleton, cytosol, extracellular 13.95 30.92
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078GET2UniProt:A0A078GET2EnsemblPlants:CDY23597ProteinID:CDY23597
ProteinID:CDY23597.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_2_AO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00023808001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF27SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEF057SEG:seg::::
Description
BnaC05g39970DBnaC05g39970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GET2]
Coordinates
chrLK032145:+:305534..308207
Molecular Weight (calculated)
61947.8 Da
IEP (calculated)
9.215
GRAVY (calculated)
-0.257
Length
552 amino acids
Sequence
(BLAST)
001: MMQGGKLLTV FVCLVSTVAL VNAGDPYFYY TWNVTYGTVA PLGIPQQVIL INGQFPGPNL NSTSNNNVVI NVFNNLDEPF LLTWSGLQHR KNSWQDGVTG
101: TSCPIPAGTN YTYHFQPKDQ IGSYFYYPST ALHRFSGGFG GLRVNSRLLI PVPYADPEDD YTVLINDWYT KSHTALKTFL DSGRTLGSPD GVLINGKSGK
201: VGGPNVPLFT MKPGKTYKYR ICNVGFKSTL NFRIQGHKMK LVEMEGSHVL QNDYDSLDVH VGQCFAVLVT ADQTAKNYYM VASTRFLKKE VSTVGVMSYE
301: GSNVQASSEL PKAPVGWAWS LNQFRSFRWN LTASAARPNP QGSYHYGKIN ITRTIKLANT KNLVNGKVRF GLNGVSHVDT ETPLKLAEYF EMSEKVFKYN
401: VIKDEPAAKI TTLTVEPNVL NITFRTFVEI VFENHEKSMQ SFHLDGYSFF SVASEPGTWT PEKRNNYNLL DAVSRHTVQV FPKSWSAILL TFDNAGMWNI
501: RSENWERRYL GQQMYVSVLS PEKSLRDEYN IPLNTNLCGI VKGLPLPTPY TI
Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)
001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I
Arabidopsis Description
sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.