CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91548	Canola	cytosol	85.02	81.09
Bra022513.1-P	Field mustard	extracellular	87.34	75.41
AT4G28090.1	Thale cress	extracellular	62.45	54.11
PGSC0003DMT400048000	Potato	extracellular	54.85	49.81
KRH29100	Soybean	nucleus	56.12	48.63
KRH24127	Soybean	nucleus	55.7	48.53
VIT_03s0038g03570.t01	Wine grape	extracellular	55.49	48.52
CDY64276	Canola	cytosol	62.66	48.37
Solyc01g111970.2.1	Tomato	extracellular	54.64	48.32
CDY67479	Canola	extracellular	54.64	47.87
CDY35790	Canola	extracellular	54.64	47.79
CDX87633	Canola	extracellular	54.22	47.5
CDX73238	Canola	extracellular	54.22	47.5
CDX89586	Canola	mitochondrion	22.15	47.3
CDY68834	Canola	extracellular, vacuole	54.01	46.63
GSMUA_Achr5P11580_001	Banana	extracellular	52.95	46.57
CDY54804	Canola	extracellular, mitochondrion, nucleus, plastid	62.66	46.48
CDY55201	Canola	extracellular	53.8	46.45
CDX82897	Canola	extracellular	52.11	45.66
CDX79120	Canola	extracellular	52.11	45.66
CDY68812	Canola	cytosol, peroxisome	42.83	45.52
CDY32795	Canola	cytosol	9.7	44.23
CDY31468	Canola	extracellular	48.52	41.74
CDX97352	Canola	mitochondrion	39.66	38.52
CDY18626	Canola	extracellular	43.88	38.45
CDX81353	Canola	extracellular	43.67	38.26
CDY43557	Canola	extracellular	43.25	37.89
CDY00478	Canola	cytosol	30.8	37.82
CDY01453	Canola	extracellular, golgi	43.46	37.8
CDY29530	Canola	plastid	47.68	37.29
CDY12788	Canola	extracellular	41.98	36.65
CDY38959	Canola	extracellular	40.93	35.99
CDX75708	Canola	extracellular	40.72	35.03
CDX82540	Canola	extracellular	40.72	35.03
CDY50029	Canola	extracellular	39.87	35.0
CDY24189	Canola	extracellular, plasma membrane, vacuole	40.72	34.84
CDY23596	Canola	extracellular, plasma membrane	40.72	34.77
CDX82541	Canola	extracellular, plasma membrane	40.72	34.77
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.3	34.73
CDY43353	Canola	extracellular, plasma membrane, vacuole	40.51	34.66
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.3	34.6
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.3	34.6
CDY43995	Canola	extracellular, plasma membrane	40.51	34.59
CDX69261	Canola	extracellular	38.4	34.54
CDY39058	Canola	extracellular	39.66	34.5
CDY13534	Canola	extracellular	39.66	34.5
CDX75707	Canola	extracellular, plasma membrane, vacuole	40.08	34.23
CDX72617	Canola	extracellular	39.03	34.2
CDY42716	Canola	extracellular	38.61	33.89
CDX75611	Canola	extracellular	38.61	33.83
CDY43352	Canola	extracellular, plasma membrane	35.87	33.4
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.61	33.33
CDY54363	Canola	extracellular	37.97	33.03
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.19	32.97
CDX97339	Canola	plasma membrane	39.45	31.91
CDY04429	Canola	plasma membrane	39.24	31.74
CDX90830	Canola	extracellular	39.03	31.62
CDY49392	Canola	extracellular	29.75	31.61
CDY64023	Canola	extracellular	37.97	30.77
CDY38866	Canola	extracellular	37.97	30.77
CDX94466	Canola	extracellular, plasma membrane, plastid, vacuole	38.82	30.72
CDX99917	Canola	plasma membrane	38.61	30.65
CDX89433	Canola	plasma membrane	38.61	30.6
CDY48757	Canola	extracellular, plasma membrane, vacuole	37.97	30.25
CDY05676	Canola	extracellular, plasma membrane, vacuole	37.97	30.2
CDX91586	Canola	extracellular	37.55	29.82
CDX76855	Canola	cytoskeleton, cytosol, extracellular	15.61	29.72
CDY46940	Canola	plasma membrane	37.13	29.48
CDY68850	Canola	extracellular	17.72	27.72
CDX89588	Canola	cytosol	8.65	14.91
CDY48940	Canola	extracellular	0.84	5.13
CDY68876	Canola	cytosol	0.63	2.68

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	GO:A0A078FTV0	UniProt:A0A078FTV0	EnsemblPlants:CDY16369	ProteinID:CDY16369
ProteinID:CDY16369.1	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00090900001	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PANTHER:PTHR11709	PANTHER:PTHR11709:SF64
SUPFAM:SSF49503	UniParc:UPI0004EECB1A	:	:	:	:

Description

BnaA02g11730DBnaA02g11730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTV0]

Coordinates

chrLK032063:+:199622..201848

Molecular Weight (calculated)

53931.6 Da

IEP (calculated)

10.499

GRAVY (calculated)

-0.422

Length

474 amino acids

Sequence
(BLAST)

001: MSRESLLRWI SINHLLRGYL TQITSGLWLF LRLATRGCLQ NVKCVGNGGI KALNAPQKMT KGCRKTLSLI SSSRPGTPVP FPQPAGDFTI LIGDWYTGED
101: HKDLKARLDG GRMIPRPYSV LINGNEDTAS TSLTVDKGKT YRFRISNVGL QLSLNFEILG HMLKLVEVEG TYTIQTKFTS LDIHVGQSYS VLVTMDQPPQ
201: NYSIVVGTRF TDSRSTNRII LHYSNSKSSK FVPNRQPDND IDFSIKQARS IKTNLTASRQ RQDAQGSYHY GRIKISRTLI LESSAGVVNR KQRYAINGVS
301: FVPADTPLKL ADYFKIKGVF KVGSIPDKPG RAGIRLETAV MGVHHKDFLE IVFQNREKYV QTYHLDGYNF WVVGIGNRWS TWSQASRRDY NLRDAISRST
401: TQVYPKSWTA IYVAFDNVGM WNFRSEFWAR QYLGQQFYFR VHSPANSTRD EYPLPKNALL CGRASNRHRR DFIP

Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)

001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F

Arabidopsis Description

sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.