Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G38420.1 | Thale cress | extracellular | 75.69 | 75.41 |
| Bra022513.1-P | Field mustard | extracellular | 70.75 | 70.49 |
| CDX91548 | Canola | cytosol | 61.79 | 68.01 |
| PGSC0003DMT400048000 | Potato | extracellular | 61.06 | 63.98 |
| Solyc01g111970.2.1 | Tomato | extracellular | 61.43 | 62.69 |
| CDY16369 | Canola | mitochondrion | 54.11 | 62.45 |
| VIT_03s0038g03570.t01 | Wine grape | extracellular | 61.61 | 62.18 |
| KRH24127 | Soybean | nucleus | 61.79 | 62.13 |
| KRH29100 | Soybean | nucleus | 61.43 | 61.43 |
| GSMUA_Achr5P11580_001 | Banana | extracellular | 58.5 | 59.37 |
| AT1G76160.1 | Thale cress | extracellular | 58.68 | 59.33 |
| AT1G41830.1 | Thale cress | extracellular | 58.14 | 58.67 |
| AT1G21850.1 | Thale cress | extracellular | 57.95 | 57.53 |
| AT1G21860.1 | Thale cress | extracellular | 56.31 | 57.25 |
| AT4G22010.1 | Thale cress | extracellular | 56.49 | 57.12 |
| AT5G66920.1 | Thale cress | extracellular, plasma membrane, vacuole | 50.09 | 50.18 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 47.71 | 47.37 |
| AT2G23630.2 | Thale cress | extracellular | 47.17 | 47.25 |
| AT4G37160.1 | Thale cress | extracellular | 46.25 | 46.77 |
| AT3G13390.1 | Thale cress | extracellular, plasma membrane, vacuole | 46.98 | 46.39 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 46.62 | 45.95 |
| AT1G55560.1 | Thale cress | extracellular | 45.7 | 45.54 |
| AT1G75790.1 | Thale cress | extracellular | 44.79 | 44.95 |
| AT4G12420.2 | Thale cress | extracellular, plasma membrane | 46.8 | 43.61 |
| AT4G25240.1 | Thale cress | plasma membrane | 44.97 | 41.77 |
| AT5G51480.1 | Thale cress | extracellular, plasma membrane | 44.61 | 41.22 |
| AT5G48450.1 | Thale cress | extracellular | 44.79 | 39.45 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | EntrezGene:828925 | ProteinID:AEE85440.1 | ArrayExpress:AT4G28090 | EnsemblPlantsGene:AT4G28090 |
| RefSeq:AT4G28090 | TAIR:AT4G28090 | RefSeq:AT4G28090-TAIR-G | EnsemblPlants:AT4G28090.1 | TAIR:AT4G28090.1 | Unigene:At.54532 |
| ProteinID:CAB36778.1 | ProteinID:CAB79611.1 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:Cupredoxin |
| EMBL:DQ446876 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 |
| GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 | GO:GO:0055114 | InterPro:IPR008972 | RefSeq:NP_194538.1 |
| PFAM:PF00394 | PFAM:PF07731 | PFAM:PF07732 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020127 | PO:PO:0020128 | PO:PO:0025022 | PANTHER:PTHR11709 |
| PANTHER:PTHR11709:SF64 | UniProt:Q9SUD0 | SUPFAM:SSF49503 | UniParc:UPI0000048A00 | Symbol:sks10 | : |
Description
sks10Multi-copper oxidase type I family protein [Source:UniProtKB/TrEMBL;Acc:Q9SUD0]
Coordinates
chr4:-:13961888..13964229
Molecular Weight (calculated)
62254.8 Da
IEP (calculated)
10.054
GRAVY (calculated)
-0.350
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWWLNGGVW MMMMTTTIIS FVKAEDTLFY NWRVTYGKIA LDTLPRRGIL INGQFPGPEI RSLTNDNLVI NVQNDLDDPF LLSWNGVHMR KNSYQDGVYG
101: TNCPIPPGKN YTYDFQVKDQ VGSYFYFPSL AVQKAAGGYG SLRIYSLPRI PVPFPEPAED FTFLVNDWYR RNHTTLKKIL DGGRKLPLMP DGVMINGQGV
201: STVYSITVDK GKTYRFRVSN VGLQTSLNLE ILGHQLKLIE VEGTHTVQTM YTSLDIHVGQ TYSFLVTMDQ PPQNYSIVVS TRFINAEVVI RATLHYSNSK
301: GHKIITARRP DPDDVEWSIK QAQSIRTNLT ASGPRTNPQG SYHYGKMKIS RTLILESSAA LVKRKQRYAI NGVSFVPSDT PLKLADHFKI KDVFKVGTIP
401: DKPRRGGGIR LDTAVMGAHH NAFLEIIFQN REKIVQSYHL DGYNFWVVGI NKGIWSRASR REYNLKDAIS RSTTQVYPKS WTAVYVALDN VGMWNLRSQF
501: WARQYLGQQF YLRVHSPNHS PKDEYPLPKN ALLCGRASNK NMSIITP
101: TNCPIPPGKN YTYDFQVKDQ VGSYFYFPSL AVQKAAGGYG SLRIYSLPRI PVPFPEPAED FTFLVNDWYR RNHTTLKKIL DGGRKLPLMP DGVMINGQGV
201: STVYSITVDK GKTYRFRVSN VGLQTSLNLE ILGHQLKLIE VEGTHTVQTM YTSLDIHVGQ TYSFLVTMDQ PPQNYSIVVS TRFINAEVVI RATLHYSNSK
301: GHKIITARRP DPDDVEWSIK QAQSIRTNLT ASGPRTNPQG SYHYGKMKIS RTLILESSAA LVKRKQRYAI NGVSFVPSDT PLKLADHFKI KDVFKVGTIP
401: DKPRRGGGIR LDTAVMGAHH NAFLEIIFQN REKIVQSYHL DGYNFWVVGI NKGIWSRASR REYNLKDAIS RSTTQVYPKS WTAVYVALDN VGMWNLRSQF
501: WARQYLGQQF YLRVHSPNHS PKDEYPLPKN ALLCGRASNK NMSIITP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.