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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:golgi
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99917 Canola plasma membrane 80.05 51.76
CDY38866 Canola extracellular 74.09 48.89
CDY64023 Canola extracellular 73.32 48.38
CDX91586 Canola extracellular 73.83 47.74
CDY46940 Canola plasma membrane 73.06 47.24
AT5G51480.1 Thale cress extracellular, plasma membrane 68.39 44.59
CDX89433 Canola plasma membrane 67.36 43.48
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 67.36 43.41
PGSC0003DMT400035984 Potato plasma membrane 59.84 38.95
CDX97339 Canola plasma membrane 59.07 38.91
Solyc03g083900.2.1 Tomato extracellular 59.59 38.85
CDY04429 Canola plasma membrane 58.55 38.57
CDX90830 Canola extracellular 58.29 38.46
VIT_16s0022g00680.t01 Wine grape plasma membrane 58.29 38.01
KRH56354 Soybean extracellular 57.51 37.56
KRH62611 Soybean nucleus 57.51 37.5
CDY48757 Canola extracellular, plasma membrane, vacuole 49.48 32.1
CDY05676 Canola extracellular, plasma membrane, vacuole 48.7 31.54
CDY16369 Canola mitochondrion 37.82 30.8
CDY68812 Canola cytosol, peroxisome 35.23 30.49
CDX89586 Canola mitochondrion 17.1 29.73
CDX91548 Canola cytosol 37.82 29.38
CDX97352 Canola mitochondrion 36.79 29.1
CDX87633 Canola extracellular 38.86 27.73
CDX73238 Canola extracellular 38.86 27.73
CDY55201 Canola extracellular 39.38 27.69
CDY68834 Canola extracellular, vacuole 39.12 27.5
CDY67479 Canola extracellular 38.34 27.36
CDY35790 Canola extracellular 38.34 27.31
CDX79120 Canola extracellular 38.08 27.17
CDX82897 Canola extracellular 38.08 27.17
CDX82541 Canola extracellular, plasma membrane 37.56 26.13
CDY43353 Canola extracellular, plasma membrane, vacuole 37.31 25.99
CDY23596 Canola extracellular, plasma membrane 37.31 25.95
CDY43995 Canola extracellular, plasma membrane 37.31 25.95
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 37.05 25.91
CDX81353 Canola extracellular 36.27 25.88
CDY43557 Canola extracellular 36.27 25.88
CDY18626 Canola extracellular 36.27 25.88
CDY24189 Canola extracellular, plasma membrane, vacuole 37.05 25.81
CDY49392 Canola extracellular 29.79 25.78
CDY31468 Canola extracellular 36.79 25.77
CDX75707 Canola extracellular, plasma membrane, vacuole 37.05 25.77
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 36.79 25.72
CDY39058 Canola extracellular 36.01 25.5
CDY13534 Canola extracellular 36.01 25.5
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 36.27 25.45
CDY01453 Canola extracellular, golgi 35.75 25.32
CDX75708 Canola extracellular 36.01 25.23
CDX82540 Canola extracellular 36.01 25.23
CDY50029 Canola extracellular 35.23 25.19
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 35.75 25.14
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 35.75 25.14
CDY38959 Canola extracellular 34.97 25.05
CDY12788 Canola extracellular 34.46 24.49
CDY54363 Canola extracellular 33.42 23.67
CDX69261 Canola extracellular 32.12 23.53
CDY64276 Canola cytosol 37.31 23.45
CDY29530 Canola plastid 36.79 23.43
CDX72617 Canola extracellular 32.64 23.29
CDY43352 Canola extracellular, plasma membrane 30.57 23.18
CDY42716 Canola extracellular 32.38 23.15
CDX75611 Canola extracellular 32.38 23.11
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 37.05 22.38
CDY68850 Canola extracellular 17.36 22.11
CDX76855 Canola cytoskeleton, cytosol, extracellular 13.99 21.69
CDY32795 Canola cytosol 4.92 18.27
CDX89588 Canola cytosol 6.48 9.09
CDY48940 Canola extracellular 0.78 3.85
Bra034914.1-P Field mustard extracellular 0.78 3.85
CDY68876 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078EMA7EnsemblPlants:CDY00478ProteinID:CDY00478ProteinID:CDY00478.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:CupredoxinGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00110182001
InterPro:IPR008972PFAM:PF00394PFAM:PF07731PANTHER:PTHR11709PANTHER:PTHR11709:SF123SUPFAM:SSF49503
UniParc:UPI0004EE9B21:::::
Description
BnaA10g07950D
Coordinates
chrLK031919:+:532235..533703
Molecular Weight (calculated)
43641.6 Da
IEP (calculated)
8.416
GRAVY (calculated)
-0.333
Length
386 amino acids
Sequence
(BLAST)
001: MIGDWYTHNH TALRSVLDSS EELGMPDGVL INGKGPYKYN TNVPDGIQYK TINVDPGKTY RIRVHNVGVS TSLNFRIQNH KLLLVEQECR YTSQTNFTDF
101: DIHVVQSYSF LVTMDQNASS DYCIVASARF VNETEWQRVT GVGILHYSNS KGHASGLLPL PSTDVSHPWF VVNQQRGIKG ARPNPHGSHH YGQINITGTY
201: ILRSMPPTKI NGSLRSTLNG VSFLNPSTPM TLADKHRLKG VYKLDFPSRP VDSKPPRLES SIINATYKGF IQVIFQNNDT KVQTFHIDGY SFYVVTMDFG
301: NWTEDKKGSY NNWDAISRST IEVDSHLQFV SLLYTSFSCL VVSFLMFSFR FNQGHGLLYL FPGITSEFEI SEPRTLTDDI LAKKHT
Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)
001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH
Arabidopsis Description
SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.