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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68876 Canola cytosol 25.09 61.61
KRH57766 Soybean extracellular 40.0 58.51
CDY48940 Canola extracellular 10.55 37.18
Bra032154.1-P Field mustard extracellular 69.45 35.44
CDY38959 Canola extracellular 69.45 35.44
CDY68850 Canola extracellular 38.91 35.31
CDX69261 Canola extracellular 62.18 32.45
AT2G23630.2 Thale cress extracellular 62.55 31.5
CDX75611 Canola extracellular 61.82 31.42
CDX72617 Canola extracellular 61.09 31.05
CDY42716 Canola extracellular 60.73 30.93
KRH04708 Soybean endoplasmic reticulum 51.64 26.1
CDX81353 Canola extracellular 49.82 25.32
CDY12788 Canola extracellular 49.82 25.23
CDY43557 Canola extracellular 49.45 25.14
CDY18626 Canola extracellular 49.45 25.14
CDY01453 Canola extracellular, golgi 49.82 25.14
CDY49392 Canola extracellular 40.73 25.11
VIT_00s0253g00050.t01 Wine grape extracellular, mitochondrion 50.55 23.13
CDY50029 Canola extracellular 45.09 22.96
CDY54363 Canola extracellular 45.45 22.94
CDX79120 Canola extracellular 44.36 22.55
CDX82897 Canola extracellular 44.36 22.55
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 44.36 22.22
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 44.36 22.22
CDX87633 Canola extracellular 43.27 22.0
CDX73238 Canola extracellular 43.27 22.0
CDY67479 Canola extracellular 42.55 21.63
CDY35790 Canola extracellular 42.55 21.59
CDX82540 Canola extracellular 42.91 21.42
CDY55201 Canola extracellular 42.55 21.31
CDX75708 Canola extracellular 42.55 21.23
CDY31468 Canola extracellular 42.55 21.23
CDY68834 Canola extracellular, vacuole 42.18 21.13
CDX75707 Canola extracellular, plasma membrane, vacuole 42.55 21.08
CDY43995 Canola extracellular, plasma membrane 42.55 21.08
CDY23596 Canola extracellular, plasma membrane 42.55 21.08
CDX82541 Canola extracellular, plasma membrane 42.55 21.08
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 41.82 20.91
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 41.82 20.83
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 41.82 20.83
CDY24189 Canola extracellular, plasma membrane, vacuole 41.82 20.76
CDX90830 Canola extracellular 44.0 20.68
CDY43353 Canola extracellular, plasma membrane, vacuole 41.45 20.58
CDY04429 Canola plasma membrane 43.64 20.48
CDX97339 Canola plasma membrane 43.64 20.48
CDY48757 Canola extracellular, plasma membrane, vacuole 42.55 19.66
CDY05676 Canola extracellular, plasma membrane, vacuole 42.18 19.46
CDY64276 Canola cytosol 42.18 18.89
CDY43352 Canola extracellular, plasma membrane 34.55 18.66
CDX91586 Canola extracellular 40.36 18.59
CDY46940 Canola plasma membrane 40.36 18.59
CDY38866 Canola extracellular 39.27 18.46
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 40.0 18.36
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 42.55 18.31
CDY64023 Canola extracellular 38.91 18.29
CDX99917 Canola plasma membrane 39.64 18.26
CDX89433 Canola plasma membrane 39.64 18.23
CDY68812 Canola cytosol, peroxisome 28.73 17.71
CDY13534 Canola extracellular 34.18 17.25
CDX97352 Canola mitochondrion 30.55 17.21
CDY39058 Canola extracellular 33.82 17.06
CDY29530 Canola plastid 32.73 14.85
CDX91548 Canola cytosol 25.82 14.29
CDX76855 Canola cytoskeleton, cytosol, extracellular 10.18 11.24
CDY16369 Canola mitochondrion 14.91 8.65
CDY00478 Canola cytosol 9.09 6.48
CDX89586 Canola mitochondrion 5.09 6.31
CDY32795 Canola cytosol 1.09 2.88
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078DQZ6EnsemblPlants:CDX89588ProteinID:CDX89588ProteinID:CDX89588.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674GO:GO:0005488
GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00149928001InterPro:IPR008972
PFAM:PF00394PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF113SUPFAM:SSF49503UniParc:UPI0004EE6E3E
Description
BnaC04g36070D
Coordinates
chrLK031859:-:1418656..1420235
Molecular Weight (calculated)
31047.5 Da
IEP (calculated)
9.842
GRAVY (calculated)
-0.280
Length
275 amino acids
Sequence
(BLAST)
001: MKYGAKEQCH LCVTYACMGI HVHSVDMNLL PHFPRLHYSI SHLYLRLTLE DPYRFFTWTV TYGTRSPLGV PQQVILINGQ FPGPPIEGVT NDNILVNLIN
101: KIDEPLLITW NGIKQRRMSW QDGVLGTSCP IQPNSNWTYH FQLKDQIGTY TYFASTSMHR ASGAFGALNV NQRSVIFVPY HKPDGDFTLL VSDWYKMGHK
201: ALRKRLDSGR ALPLPDGLLI NGASKGLAFT GEHETLIKSV QPKTAPLHFQ MIHRRITSLN SGPGSRKDTQ TSRLS
Best Arabidopsis Sequence Match ( AT2G23630.1 )
(BLAST)
001: MKQKHLLLLG FLLAYCFSSV FVINAEDPYL FFTWTVTYGT RSPLGVPQQV ILINGQFPGP PIEGVTNNNI VVNVINKLDE PFLITWNGIK QRKMSWQDGV
101: LGTNCPIQPK SSWTYHFQLK DQIGTYAYFA STSMHRASGA FGALNVNQRS VIFVPYPKPD ADFTLLVSDW YKMGHKELQR RLDSSRALPP PDGLLINGAS
201: KGLVFTGQHG KIYRFRISNV GISTSINFRI QGHMMTLVEV EGSHTLQEVY ESLDIHVGQS VTVLVTLKAP VKDYFIVAST RFTKPILTTT GILSYQGSKI
301: RPSHPLPIGP TYHIHWSMKQ ARTIRLNLTA NAARPNPQGS FHYGTIPINR TFVLANGRAM INGKLRYTVN RVSYVNPATP LKLADWFNIP GVFNFKTIMN
401: IPTPGPSILG TSVFDVALHE YVEFVFQNNE GSIQSWHLDG TSAYVVGYGS GTWNMAKRRG YNLVDAVSRH TFQVYPMSWT SILVSLDNKG MWNLRSQIWS
501: RRYLGQELYV RVWNNEKSLY TESEPPVNVL FCGKAKHPRL I
Arabidopsis Description
sks16SKU5 similar 16 [Source:TAIR;Acc:AT2G23630]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.