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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018479.1-P Field mustard plasma membrane 99.32 99.32
CDX97339 Canola plasma membrane 99.32 99.32
CDX90830 Canola extracellular 95.56 95.73
AT4G12420.2 Thale cress extracellular, plasma membrane 92.15 91.99
VIT_02s0154g00080.t01 Wine grape extracellular 78.16 77.5
KRH04081 Soybean extracellular 78.16 77.36
KRH57349 Soybean endoplasmic reticulum 78.67 77.22
Solyc08g079090.2.1 Tomato extracellular 75.6 75.21
PGSC0003DMT400012216 Potato extracellular, plasma membrane, vacuole 75.77 74.25
CDY38866 Canola extracellular 63.99 64.1
CDX99917 Canola plasma membrane 65.19 63.99
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 64.85 63.44
CDX89433 Canola plasma membrane 64.68 63.38
CDY46940 Canola plasma membrane 64.33 63.15
CDY64023 Canola extracellular 62.97 63.08
CDX91586 Canola extracellular 63.99 62.81
CDY68876 Canola cytosol 11.6 60.71
CDY48757 Canola extracellular, plasma membrane, vacuole 60.24 59.33
CDY05676 Canola extracellular, plasma membrane, vacuole 59.9 58.89
CDY00478 Canola cytosol 38.57 58.55
CDY68850 Canola extracellular 27.82 53.8
CDY49392 Canola extracellular 37.71 49.55
CDX69261 Canola extracellular 44.2 49.15
CDX87633 Canola extracellular 45.22 48.98
CDX73238 Canola extracellular 45.22 48.98
CDY67479 Canola extracellular 45.05 48.8
CDY35790 Canola extracellular 45.05 48.71
CDY42716 Canola extracellular 44.88 48.7
CDX82897 Canola extracellular 44.88 48.61
CDX72617 Canola extracellular 44.88 48.61
CDX79120 Canola extracellular 44.88 48.61
CDY55201 Canola extracellular 45.39 48.45
CDY68834 Canola extracellular, vacuole 45.39 48.45
CDX75611 Canola extracellular 44.71 48.43
CDY38959 Canola extracellular 44.54 48.42
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 44.71 47.72
CDX82540 Canola extracellular 44.71 47.55
CDX75708 Canola extracellular 44.71 47.55
CDX82541 Canola extracellular, plasma membrane 44.88 47.39
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 44.37 47.36
CDY01453 Canola extracellular, golgi 44.03 47.34
CDY68812 Canola cytosol, peroxisome 36.01 47.31
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 44.54 47.28
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 44.37 47.1
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 44.2 47.09
CDY18626 Canola extracellular 43.34 46.95
CDX81353 Canola extracellular 43.34 46.95
CDY43557 Canola extracellular 43.34 46.95
CDX75707 Canola extracellular, plasma membrane, vacuole 44.37 46.85
CDY23596 Canola extracellular, plasma membrane 44.2 46.67
CDY43995 Canola extracellular, plasma membrane 44.2 46.67
CDY31468 Canola extracellular 43.86 46.64
CDY43353 Canola extracellular, plasma membrane, vacuole 43.86 46.39
CDY24189 Canola extracellular, plasma membrane, vacuole 43.86 46.39
CDY12788 Canola extracellular 42.83 46.22
CDY43352 Canola extracellular, plasma membrane 40.1 46.17
CDY50029 Canola extracellular 42.49 46.11
CDX97352 Canola mitochondrion 38.05 45.7
CDY48940 Canola extracellular 5.97 44.87
CDY54363 Canola extracellular 41.3 44.4
CDX91548 Canola cytosol 37.54 44.27
CDX89588 Canola cytosol 20.48 43.64
CDY39058 Canola extracellular 40.27 43.3
CDY13534 Canola extracellular 40.27 43.3
CDX89586 Canola mitochondrion 16.21 42.79
CDY64276 Canola cytosol 43.86 41.86
CDY32795 Canola cytosol 7.17 40.38
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 43.86 40.22
CDY16369 Canola mitochondrion 31.74 39.24
CDY29530 Canola plastid 40.1 38.78
CDX76855 Canola cytoskeleton, cytosol, extracellular 13.14 30.92
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078EV11EnsemblPlants:CDY04429ProteinID:CDY04429ProteinID:CDY04429.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CupredoxinGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00118471001InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF82SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EBF41F
SEG:seg:::::
Description
BnaC02g28190D
Coordinates
chrLK031953:-:973062..976402
Molecular Weight (calculated)
65616.4 Da
IEP (calculated)
9.528
GRAVY (calculated)
-0.247
Length
586 amino acids
Sequence
(BLAST)
001: MDFFKILLLM FLVNFSFCFA ADPYAFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WSGIQQRRVS WQDGLAGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFI VNPRSVIPVP FSTPEGDITI AIGDWYTRNH TALRKALDDG KDLGMPDGVL INGKGPYQYN
201: KTLVPDGIDY ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYMVASAR IVNETIWRRV
301: TGVGILHYTN SKGKAKGHLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVKINGK RRTTLSGVSF VNPSTPIRLA
401: DKHKVKGVYK LDFPKRPLTG PPRMETSIIN GIYRGFMEVI LQNNDTKMQS YHMSGYAFFA VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGA PANVLYCGAL QKLQKPQKIS SSATRSIGFT SLSMVVMALV MIMVLH
Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)
001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH
Arabidopsis Description
SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.