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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022551.1-P Field mustard plasma membrane 99.67 99.67
CDX91586 Canola extracellular 96.98 96.98
CDX99917 Canola plasma membrane 83.58 83.58
CDY38866 Canola extracellular 80.4 82.05
CDY64023 Canola extracellular 80.23 81.88
AT5G51480.1 Thale cress extracellular, plasma membrane 79.4 80.07
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 77.39 77.13
CDX89433 Canola plasma membrane 77.22 77.09
CDY00478 Canola cytosol 47.24 73.06
PGSC0003DMT400035984 Potato plasma membrane 66.67 67.12
KRH56354 Soybean extracellular 66.33 67.01
KRH62611 Soybean nucleus 66.16 66.72
Solyc03g083900.2.1 Tomato extracellular 66.0 66.55
VIT_16s0022g00680.t01 Wine grape plasma membrane 65.33 65.88
CDY68876 Canola cytosol 12.23 65.18
CDX97339 Canola plasma membrane 63.48 64.68
CDX90830 Canola extracellular 63.15 64.44
CDY04429 Canola plasma membrane 63.15 64.33
CDY48757 Canola extracellular, plasma membrane, vacuole 56.45 56.64
CDY05676 Canola extracellular, plasma membrane, vacuole 55.61 55.7
CDY68850 Canola extracellular 26.13 51.49
CDX87633 Canola extracellular 44.72 49.35
CDY55201 Canola extracellular 45.23 49.18
CDX73238 Canola extracellular 44.56 49.17
CDY68834 Canola extracellular, vacuole 45.06 49.0
CDX82897 Canola extracellular 43.72 48.24
CDX79120 Canola extracellular 43.72 48.24
CDY67479 Canola extracellular 43.55 48.06
CDY35790 Canola extracellular 43.55 47.97
CDX75708 Canola extracellular 44.22 47.91
CDY31468 Canola extracellular 44.22 47.91
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 44.22 47.83
CDX82540 Canola extracellular 44.05 47.73
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 44.05 47.64
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 43.72 47.45
CDX69261 Canola extracellular 41.88 47.44
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 43.55 47.36
CDY68812 Canola cytosol, peroxisome 35.34 47.31
CDY49392 Canola extracellular 35.18 47.09
CDY42716 Canola extracellular 42.55 47.04
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 43.22 46.99
CDX72617 Canola extracellular 42.55 46.95
CDY43352 Canola extracellular, plasma membrane 39.87 46.76
CDY43353 Canola extracellular, plasma membrane, vacuole 43.38 46.75
CDY50029 Canola extracellular 42.21 46.67
CDY24189 Canola extracellular, plasma membrane, vacuole 43.22 46.57
CDX75707 Canola extracellular, plasma membrane, vacuole 43.22 46.49
CDY43557 Canola extracellular 42.04 46.4
CDY38959 Canola extracellular 41.88 46.38
CDY23596 Canola extracellular, plasma membrane 43.05 46.31
CDX82541 Canola extracellular, plasma membrane 43.05 46.31
CDY18626 Canola extracellular 41.88 46.21
CDX75611 Canola extracellular 41.88 46.21
CDX81353 Canola extracellular 41.88 46.21
CDY48940 Canola extracellular 6.03 46.15
CDY43995 Canola extracellular, plasma membrane 42.88 46.13
CDY01453 Canola extracellular, golgi 41.54 45.5
CDX97352 Canola mitochondrion 37.02 45.29
CDY12788 Canola extracellular 41.04 45.12
CDY54363 Canola extracellular 40.7 44.59
CDY39058 Canola extracellular 40.7 44.59
CDY13534 Canola extracellular 40.54 44.4
CDX89586 Canola mitochondrion 16.25 43.69
CDX91548 Canola cytosol 35.85 43.06
CDY64276 Canola cytosol 42.71 41.53
CDX89588 Canola cytosol 18.59 40.36
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 42.38 39.59
CDY29530 Canola plastid 39.87 39.27
CDY16369 Canola mitochondrion 29.48 37.13
CDY32795 Canola cytosol 6.03 34.62
CDX76855 Canola cytoskeleton, cytosol, extracellular 11.73 28.11
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078I7N8UniProt:A0A078I7N8EnsemblPlants:CDY46940ProteinID:CDY46940
ProteinID:CDY46940.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00086417001
InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF123
SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE2D88SEG:seg:
Description
BnaAnng08180DBnaAnng08180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7N8]
Coordinates
chrLK032691:-:179470..182298
Molecular Weight (calculated)
66743.9 Da
IEP (calculated)
5.790
GRAVY (calculated)
-0.204
Length
597 amino acids
Sequence
(BLAST)
001: MAAAYFFSRF TTFPFLFSLA LLCGFSLAGD PSVSYVFEVS YITASPLGVP QQVIAINGKF PGPVINVTTN YNVDVNVFNR LDEPFLFTWN GIEMRGESWQ
101: DGVLGTNCPI PPNWNFTYSF QVKDQIGSFF YFPSLNLQRA SGGFGPIIIN NRDRIPIPFN EPDGEISFMI GDWYTQNHTA LRGVLDSGEE LGMPDGVLIN
201: GKGPYKYTSS VPDGIQYETI NVDPGKTYRI RVHNVGTSTS LNFRIQNHKM LLVETEGHYN LQTNFTDFDI HVGQSYSFLV TMDQNASSDY YIVASARFVN
301: ETAWQRVTGV GVLHYSNSKG QASGPLPVPA TDVSQPWSVM NQQRAIRQNT TASGARPNPQ GSYHYGEINI TDTYILRSMP PTKINGSVHA TLNGISFLNP
401: ITPMRLADKH KVNGVYKLDF PERPADNIPP RLESSIINAT YKGFIQIIFQ NNDTKVQSFH IDGYSFYVVA MDFGNWTEDK KGSYNNWDAA SRSTVEVYPG
501: AWTAVLLSLD NAGVWNIRVQ NLDRWYLGQE TYMRIINPEE NGSTEMDQPG NALYCGALKS MQKDQIHSSA TSILNGKWNL VFSLVMVLLA LVPVFFC
Best Arabidopsis Sequence Match ( AT5G51480.1 )
(BLAST)
001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC
Arabidopsis Description
SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.