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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015781.1-P Field mustard extracellular 99.26 99.26
CDX87633 Canola extracellular 99.08 99.08
AT1G76160.1 Thale cress extracellular 91.31 91.31
CDY68834 Canola extracellular, vacuole 92.61 91.26
CDY55201 Canola extracellular 92.42 91.07
KRH06000 Soybean endoplasmic reticulum 84.66 84.66
KRH60965 Soybean nucleus 84.66 83.73
CDY67479 Canola extracellular 83.36 83.36
CDY35790 Canola extracellular 83.18 83.03
KRH17495 Soybean nucleus 83.92 83.0
KRH51639 Soybean nucleus 83.55 82.63
VIT_18s0001g00470.t01 Wine grape extracellular 81.89 81.89
Solyc04g082140.2.1 Tomato extracellular 79.67 79.81
PGSC0003DMT400025805 Potato extracellular 79.3 79.44
Solyc12g094460.1.1 Tomato extracellular 76.89 76.47
PGSC0003DMT400075398 Potato extracellular 76.16 75.74
Solyc12g094470.1.1 Tomato nucleus 73.38 73.11
CDY31468 Canola extracellular 73.94 72.6
PGSC0003DMT400075620 Potato extracellular 72.64 72.38
CDX82897 Canola extracellular 70.06 70.06
CDX79120 Canola extracellular 70.06 70.06
CDY68876 Canola cytosol 13.12 63.39
CDX91548 Canola cytosol 55.64 60.56
CDY64276 Canola cytosol 68.58 60.42
CDY29530 Canola plastid 66.17 59.08
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 68.95 58.37
CDY68812 Canola cytosol, peroxisome 47.32 57.4
CDY18626 Canola extracellular 57.12 57.12
CDY68850 Canola extracellular 31.98 57.1
CDY01453 Canola extracellular, golgi 57.49 57.06
CDX81353 Canola extracellular 56.75 56.75
CDY12788 Canola extracellular 56.75 56.54
CDY43557 Canola extracellular 56.01 56.01
CDY23596 Canola extracellular, plasma membrane 56.19 54.77
CDY43995 Canola extracellular, plasma membrane 56.01 54.59
CDX69261 Canola extracellular 53.05 54.46
CDY43353 Canola extracellular, plasma membrane, vacuole 55.64 54.33
CDY49392 Canola extracellular 44.73 54.26
CDY50029 Canola extracellular 54.16 54.26
CDX82541 Canola extracellular, plasma membrane 55.64 54.23
CDX75707 Canola extracellular, plasma membrane, vacuole 55.64 54.23
CDY16369 Canola mitochondrion 47.5 54.22
CDY24189 Canola extracellular, plasma membrane, vacuole 55.45 54.15
CDY42716 Canola extracellular 53.97 54.07
CDX72617 Canola extracellular 53.97 53.97
CDX82540 Canola extracellular 54.71 53.72
CDX97352 Canola mitochondrion 48.43 53.69
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 54.71 53.62
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 54.71 53.62
CDX75708 Canola extracellular 54.53 53.54
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 54.16 53.27
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 53.97 53.19
CDX75611 Canola extracellular 53.05 53.05
CDY43352 Canola extracellular, plasma membrane 49.91 53.05
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 53.6 52.82
CDY38959 Canola extracellular 51.94 52.13
CDY54363 Canola extracellular 52.5 52.11
CDX89586 Canola mitochondrion 20.33 49.55
KRH57767 Soybean cytosol, peroxisome 32.53 49.16
CDY13534 Canola extracellular 46.4 46.05
CDY39058 Canola extracellular 46.21 45.87
CDX97339 Canola plasma membrane 48.98 45.22
CDY04429 Canola plasma membrane 48.98 45.22
CDY48757 Canola extracellular, plasma membrane, vacuole 49.72 45.21
CDY32795 Canola cytosol 8.69 45.19
CDX90830 Canola extracellular 48.8 45.13
CDY05676 Canola extracellular, plasma membrane, vacuole 49.54 44.97
CDY64023 Canola extracellular 48.24 44.62
CDY38866 Canola extracellular 48.24 44.62
CDY46940 Canola plasma membrane 49.17 44.56
CDX99917 Canola plasma membrane 48.98 44.39
CDX91586 Canola extracellular 48.61 44.05
CDX89588 Canola cytosol 22.0 43.27
CDX89433 Canola plasma membrane 47.13 42.64
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.77 42.24
CDY48940 Canola extracellular 5.91 41.03
CDY00478 Canola cytosol 27.73 38.86
CDX76855 Canola cytoskeleton, cytosol, extracellular 15.9 34.54
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078CE67EnsemblPlants:CDX73238ProteinID:CDX73238ProteinID:CDX73238.1
InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:CuRO_3_AO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00103740001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF90SUPFAM:SSF49503SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EDDC27:::::
Description
BnaC06g36860D
Coordinates
chrLK031797:-:2820816..2823947
Molecular Weight (calculated)
59805.7 Da
IEP (calculated)
8.565
GRAVY (calculated)
-0.206
Length
541 amino acids
Sequence
(BLAST)
001: MVANASLAAA LIVGFALLFA VTAESPYRFF EWNVTYGDIY PLGVRQQGIL INGQFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGVQQR RNSYVDGVYG
101: TTCPIPPGKN YTYILQVKDQ IGSFYYFPSL AFHKAAGGFG GLRILSRPGI PVPFADPAGD YTVLIGDWYK ANHTDLKAQL DSGRKLPLPD GILINGRGSG
201: ATLNVEQGKT YRLRISNIGL QHSLNFRIQN HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQPAQ DYYVVVSSRF TSDVLTTTGV LRYSGSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVN GKQRYAVNSV SFNPADTPLK LADYFKIDGV YRVGSIQSQP
401: TGGGIYLDTS VMQTDYRTFI EIVFENSEDI VQSWHLDGYS FWVVGMDGGQ WTPDSRNEYN LRDAVARCTV QVYPSSWTAI YIALDNVGMW NLRSEFWARQ
501: YLGQQFYLRV YTTSTSLRDE YPIPKNALLC GRASGRSTRP L
Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)
001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L
Arabidopsis Description
sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.