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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025818.1-P Field mustard extracellular 94.92 94.92
AT1G21850.1 Thale cress extracellular 79.85 79.85
AT1G21860.1 Thale cress extracellular 77.13 79.0
CDY29530 Canola plastid 83.12 75.58
CDX73238 Canola extracellular 72.6 73.94
CDX87633 Canola extracellular 72.6 73.94
CDY68834 Canola extracellular, vacuole 72.78 73.04
CDY55201 Canola extracellular 72.6 72.86
KRH60965 Soybean nucleus 71.32 71.85
KRH06000 Soybean endoplasmic reticulum 69.87 71.16
KRH51639 Soybean nucleus 70.42 70.93
KRH17495 Soybean nucleus 69.69 70.2
CDY67479 Canola extracellular 68.42 69.69
PGSC0003DMT400025805 Potato extracellular 68.24 69.63
CDY35790 Canola extracellular 68.42 69.56
Solyc04g082140.2.1 Tomato extracellular 67.88 69.26
VIT_18s0001g00470.t01 Wine grape extracellular 67.88 69.13
Solyc12g094460.1.1 Tomato extracellular 66.97 67.83
Solyc12g094470.1.1 Tomato nucleus 66.79 67.77
PGSC0003DMT400075620 Potato extracellular 66.79 67.77
PGSC0003DMT400075398 Potato extracellular 66.61 67.46
CDX82897 Canola extracellular 63.34 64.51
CDX79120 Canola extracellular 63.34 64.51
CDY68876 Canola cytosol 12.89 63.39
CDY68850 Canola extracellular 31.4 57.1
CDY68812 Canola cytosol, peroxisome 45.01 55.61
CDY01453 Canola extracellular, golgi 54.99 55.6
CDY64276 Canola cytosol 61.71 55.37
CDY18626 Canola extracellular 54.08 55.08
CDX81353 Canola extracellular 53.72 54.71
CDY12788 Canola extracellular 53.72 54.51
CDX91548 Canola cytosol 49.0 54.33
CDY43557 Canola extracellular 53.18 54.16
CDX82541 Canola extracellular, plasma membrane 54.45 54.05
CDY50029 Canola extracellular 52.63 53.7
CDX75707 Canola extracellular, plasma membrane, vacuole 54.08 53.69
CDY54804 Canola extracellular, mitochondrion, nucleus, plastid 62.25 53.68
CDY43353 Canola extracellular, plasma membrane, vacuole 53.9 53.61
CDY49392 Canola extracellular 43.38 53.59
CDY23596 Canola extracellular, plasma membrane 53.9 53.51
CDY43995 Canola extracellular, plasma membrane 53.9 53.51
CDY24189 Canola extracellular, plasma membrane, vacuole 53.72 53.43
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 52.27 52.46
CDX97352 Canola mitochondrion 46.46 52.46
CDY42716 Canola extracellular 51.36 52.41
CDX69261 Canola extracellular 50.09 52.37
CDX75708 Canola extracellular 52.27 52.27
CDX82540 Canola extracellular 52.27 52.27
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 51.91 52.09
CDX72617 Canola extracellular 51.0 51.94
CDY54363 Canola extracellular 51.18 51.74
CDY43352 Canola extracellular, plasma membrane 47.55 51.47
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 51.54 51.45
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 51.54 51.45
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 51.18 51.27
CDY38959 Canola extracellular 49.91 51.02
CDX75611 Canola extracellular 50.09 51.02
CDX89586 Canola mitochondrion 19.78 49.1
CDY32795 Canola cytosol 9.26 49.04
CDY16369 Canola mitochondrion 41.74 48.52
CDY13534 Canola extracellular 47.19 47.71
CDY39058 Canola extracellular 47.19 47.71
KRH57767 Soybean cytosol, peroxisome 30.31 46.65
CDY46940 Canola plasma membrane 47.91 44.22
CDX90830 Canola extracellular 46.82 44.1
CDX97339 Canola plasma membrane 46.82 44.03
CDY04429 Canola plasma membrane 46.64 43.86
CDX91586 Canola extracellular 47.37 43.72
CDY48757 Canola extracellular, plasma membrane, vacuole 47.19 43.7
CDY05676 Canola extracellular, plasma membrane, vacuole 47.01 43.46
CDY38866 Canola extracellular 46.1 43.42
CDY64023 Canola extracellular 45.92 43.25
CDX99917 Canola plasma membrane 46.82 43.22
CDX89433 Canola plasma membrane 46.28 42.64
CDX89588 Canola cytosol 21.23 42.55
CDX94466 Canola extracellular, plasma membrane, plastid, vacuole 46.1 42.4
CDY48940 Canola extracellular 5.99 42.31
CDY00478 Canola cytosol 25.77 36.79
CDX76855 Canola cytoskeleton, cytosol, extracellular 15.24 33.73
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10GO:A0A078H3R0UniProt:A0A078H3R0EnsemblPlants:CDY31468ProteinID:CDY31468
ProteinID:CDY31468.1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2InterPro:Cu-oxidase_3InterPro:CuRO_1_AAO-likeInterPro:Cupredoxin
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00047741001InterPro:IPR008972PFAM:PF00394PFAM:PF07731
PFAM:PF07732PANTHER:PTHR11709PANTHER:PTHR11709:SF90SUPFAM:SSF49503SignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI0004EDFE96:::::
Description
BnaC05g15770DBnaC05g15770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3R0]
Coordinates
chrLK032273:-:89883..93220
Molecular Weight (calculated)
61320.1 Da
IEP (calculated)
8.819
GRAVY (calculated)
-0.197
Length
551 amino acids
Sequence
(BLAST)
001: MKNTKMAANC KIAYAFVIGL SLLIATAAED PYIFYEWHVT YGTISPMGVQ QQGILINKMF PGPEIRSVTN DNLIINVFNE LDEPFLISWA GIQNRKNSFQ
101: DGVYGTTCPI PPGKNYTYVL QVKDQIGSFY YFPSLGIHKA AGGFGGIRIS SRPMIPVPFP PPADDYTVLI GDWYKTDHKA LRAQLDNGGK LPLPDGILIN
201: GLNSGATLNI QPGNTYRLRI SNVGLQNSLN FRIQNHEMKL VEVEGTHTLQ NVYSSLDVHV GQSYSVLITA NQPAKDYYIV VSSRFTPKVL TTTGVLHYSN
301: SAGPVSGPIP AAPIPLSWSF SQARTIRTNL TASGPRPNPQ GTYHYGMVNV TRTIKLVSSA GQIEGKQRYA VNSASFTPSD TPLKLADYFK IDGVYNPGSM
401: SDQPTDAPIF PVTSVLQADY KAFVEIVFEN WEDIVQSWHF NGHSFFVVGM ELGKWRPDRR KIYNLNDAVS RCTIQVYPRS WTAIYVGLDN VGMWNLRSEF
501: WERQYLGQQL YVRVYTNSTS LRDEYQIPTN ALLCGRASGA HKGLLLSGFE N
Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.