Factsheet for TraesCS1B01G314600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G303600.1	Wheat	extracellular	96.96	96.96
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	96.42	96.42
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	8.59	76.19
EES19711	Sorghum	extracellular	74.6	74.6
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	69.23	69.6
GSMUA_Achr11P...	Banana	vacuole	64.04	67.93
GSMUA_Achr8P01580_001	Banana	extracellular	62.08	67.25
GSMUA_Achr5P27810_001	Banana	extracellular	63.15	66.98
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	61.9	66.03
VIT_00s1643g00010.t01	Wine grape	vacuole	63.69	64.73
VIT_00s1309g00010.t01	Wine grape	vacuole	63.69	64.73
GSMUA_Achr10P...	Banana	extracellular, golgi	65.3	64.72
CDY68876	Canola	cytosol	12.88	64.29
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	64.04	64.27
Solyc05g055720.1.1	Tomato	nucleus	10.2	63.33
CDY43352	Canola	extracellular, plasma membrane	57.42	63.06
CDX75708	Canola	extracellular	62.08	62.98
CDX82540	Canola	extracellular	61.9	62.79
Bra001504.1-P	Field mustard	extracellular	61.9	62.79
CDY10549	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.54	62.66
AT3G13390.1	Thale cress	extracellular, plasma membrane, vacuole	62.08	62.64
CDY56013	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.36	62.48
Bra001503.1-P	Field mustard	extracellular, plasma membrane	61.9	62.34
CDX82541	Canola	extracellular, plasma membrane	61.9	62.34
Bra030850.1-P	Field mustard	plasma membrane	61.18	62.3
AT3G13400.1	Thale cress	extracellular, plasma membrane	61.36	62.25
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.18	62.18
KRH50513	Soybean	vacuole	61.0	62.0
CDX75707	Canola	extracellular, plasma membrane, vacuole	61.54	61.98
KRG89471	Soybean	mitochondrion	61.72	61.94
Bra039389.1-P	Field mustard	plasma membrane	57.6	61.92
Bra030849.1-P	Field mustard	cytosol	18.25	61.82
CDY43994	Canola	endoplasmic reticulum, extracellular, plasma membrane	61.0	61.78
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	61.0	61.78
CDY23596	Canola	extracellular, plasma membrane	61.18	61.62
CDY23597	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.82	61.59
AT1G55560.1	Thale cress	extracellular	60.47	61.57
CDY43995	Canola	extracellular, plasma membrane	61.0	61.44
KRH31599	Soybean	extracellular	60.64	61.41
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	60.64	61.41
AT1G55570.1	Thale cress	extracellular, plasma membrane	60.47	60.9
CDX97352	Canola	mitochondrion	53.13	60.86
CDY24189	Canola	extracellular, plasma membrane, vacuole	60.29	60.83
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.11	60.65
CDY43353	Canola	extracellular, plasma membrane, vacuole	59.93	60.47
CDY50029	Canola	extracellular	58.14	60.19
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	59.57	60.11
Bra038001.1-P	Field mustard	extracellular, vacuole	59.57	60.0
CDY49392	Canola	extracellular	47.76	59.87
PGSC0003DMT400016672	Potato	endoplasmic reticulum	59.21	59.75
CDY68850	Canola	extracellular	32.2	59.41
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	59.03	59.14
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	58.5	59.03
Solyc03g063150.2.1	Tomato	unclear	58.68	58.99
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	58.5	58.81
Solyc11g008860.1.1	Tomato	extracellular	58.32	58.74
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	59.57	58.73
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	58.5	58.71
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	58.32	58.53
CDY54363	Canola	extracellular	56.71	58.17
Bra034680.1-P	Field mustard	extracellular, plasma membrane	57.42	58.05
CDY32795	Canola	cytosol	10.73	57.69
Bra002824.1-P	Field mustard	cytosol	10.91	57.55
GSMUA_Achr3P09610_001	Banana	plastid	62.43	57.12
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	63.69	56.96
PGSC0003DMT400060352	Potato	extracellular	56.17	56.88
Solyc05g055710.2.1	Tomato	extracellular	45.62	56.17
TraesCS7B01G359700.1	Wheat	extracellular	49.73	51.29
TraesCS2B01G274800.1	Wheat	vacuole	48.84	50.09
TraesCS2B01G423900.1	Wheat	extracellular	49.73	49.91
TraesCS2B01G277200.1	Wheat	extracellular	47.23	48.26
TraesCS3B01G195700.1	Wheat	extracellular	36.14	44.69
TraesCS1B01G204100.1	Wheat	extracellular, plasma membrane	45.98	43.19
TraesCS3B01G101500.1	Wheat	extracellular	44.36	41.61
TraesCS7B01G202500.1	Wheat	extracellular	42.75	40.03
TraesCS3B01G101200.1	Wheat	extracellular	44.36	38.87
Zm00001d004806_P001	Maize	plastid	5.72	37.65
Os05t0485800-00	Rice	plasma membrane	45.26	37.15

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF127	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G314600
EnsemblPlants:TraesCS1B01G314600.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:539480652..539482421

Molecular Weight (calculated)

62063.4 Da

IEP (calculated)

7.425

GRAVY (calculated)

-0.160

Length

559 amino acids

Sequence
(BLAST)

001: MATTMTMRGT AAGAVLLLAL LLLSTTVARA EDPYVFMEWH VTYGTKNIVG TPQKVILING EFPGPRINCS SNNNIVVNVF NELDQPLLFT WNGIQHRKNS
101: WQDGLPGTNC PVAPGTNYTY HWQPKDQIGT FFYFPSIGMQ RVVGGFGLIS VVSRLLIPVP YDPPADDLQV LIGDWFTKDH AVMASLLDAG RNFGRPAGVL
201: INGRGGKEAA DPPMFTWEAA KTYQLRICNV GIKSSLNFRI QGHDMKLVEM DGSHTIQGMY ESLDVHVGQC MAVLVDADQK PADYLMVAST RFMAGPSSVS
301: AVIRYAGSNT PPAANVPEPP AGWAWSINQW RSFRWNLTAS AARPNPQGSY HYGQINITRT IKLMVTRGHI DGKLRYGFNG VSHVDADTPL KLAEYFNVSD
401: QVFKYNQMGD EPPAVNGPMH VVPNVISAEF RTFIEVVFEN PEKSMESVHI DGYAFFAVGM GPGKWTPAER KTYNLLDAVS RHTIQVYPRS WSAVMLTFDN
501: AGMWNVRTNL WERHYLGEQL YMSVVSPARS LRDEYNMPEN ALRCGKVVGL PMPPSYLPA

Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)

001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I

Arabidopsis Description

sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.