Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G403100.1 | Wheat | extracellular | 95.15 | 94.98 |
| TraesCS2A01G406200.3 | Wheat | plasma membrane | 87.61 | 80.66 |
| HORVU2Hr1G096250.3 | Barley | extracellular | 44.7 | 79.81 |
| Os04t0561900-01 | Rice | vacuole | 76.3 | 76.71 |
| EES12655 | Sorghum | extracellular | 76.3 | 73.53 |
| Zm00001d026132_P001 | Maize | vacuole | 73.25 | 70.96 |
| TraesCS7B01G359700.1 | Wheat | extracellular | 61.4 | 63.1 |
| TraesCS2B01G274800.1 | Wheat | vacuole | 61.4 | 62.75 |
| TraesCS2B01G277200.1 | Wheat | extracellular | 54.94 | 55.94 |
| TraesCS3B01G195700.1 | Wheat | extracellular | 40.75 | 50.22 |
| TraesCS3B01G371800.1 | Wheat | extracellular, golgi, vacuole | 49.73 | 49.82 |
| TraesCS1B01G314600.1 | Wheat | plasma membrane | 49.91 | 49.73 |
| TraesCS1B01G204100.1 | Wheat | extracellular, plasma membrane | 48.83 | 45.71 |
| TraesCS7B01G202500.1 | Wheat | extracellular | 46.68 | 43.55 |
| TraesCS3B01G101500.1 | Wheat | extracellular | 46.32 | 43.29 |
| TraesCS3B01G101200.1 | Wheat | extracellular | 45.96 | 40.13 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:CuRO_1_AAO-like |
| InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR008972 | PFAM:PF00394 | PFAM:PF07731 |
| PFAM:PF07732 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF64 | SUPFAM:SSF49503 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G423900 |
| EnsemblPlants:TraesCS2B01G423900.1 | TIGR:cd13846 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:609955609..609958672
Molecular Weight (calculated)
61019.8 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.291
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAARVVA LACVLSLVLS AQAEAPYRFF DWEVTYGDIN PLGGVPQQGI LINGQFPGPE VDCQTNDNLV INVRNRLPEP FLLSWNGIQQ RKNSWQDGVS
101: GTNCPIPPGQ NYTYHMQAKD QIGSFFYFPS LAFHKAAGGF GAIRINSRPR IPVPFPPPAD EFTVLIGDWY NTTHKALQAM LDDGKLLPSP DAILINGKGP
201: GRANFTVEQG KTYRLRISNV GLRSTLNFMI QDHNVTLVEV EGTHTVQNTY TSLDVHAGQS LSVLFTADRP ARSYHIAVSS RFTNQTLNST AVLRYAGSTG
301: PVSGPLRAGN QSDVDFSLNQ ARSIRTNLTA SGPRPNPQGS YHYGSINVSR TIRLANSAGQ VGGKPRYGVN GVSYVDADTP LKLADYYNIS GVFRMDGIPD
401: APAATHSGTQ NGTGADAALK NQTAVMDSDH RSFVEVVFEN SEDSVQSWHL DGYSVFVVGM DKGAWSEESR KGYNLVDAVT RCTVQVYPRG WTAIFIALDN
501: VGMWNVRSED WVRRYLGQQF YLRVYTPTHS VRDELPVPTN AILCGRATNK SRLPFSQ
101: GTNCPIPPGQ NYTYHMQAKD QIGSFFYFPS LAFHKAAGGF GAIRINSRPR IPVPFPPPAD EFTVLIGDWY NTTHKALQAM LDDGKLLPSP DAILINGKGP
201: GRANFTVEQG KTYRLRISNV GLRSTLNFMI QDHNVTLVEV EGTHTVQNTY TSLDVHAGQS LSVLFTADRP ARSYHIAVSS RFTNQTLNST AVLRYAGSTG
301: PVSGPLRAGN QSDVDFSLNQ ARSIRTNLTA SGPRPNPQGS YHYGSINVSR TIRLANSAGQ VGGKPRYGVN GVSYVDADTP LKLADYYNIS GVFRMDGIPD
401: APAATHSGTQ NGTGADAALK NQTAVMDSDH RSFVEVVFEN SEDSVQSWHL DGYSVFVVGM DKGAWSEESR KGYNLVDAVT RCTVQVYPRG WTAIFIALDN
501: VGMWNVRSED WVRRYLGQQF YLRVYTPTHS VRDELPVPTN AILCGRATNK SRLPFSQ
001: MKVKSMNTRA MITTLLFLIS LAFAEDPYRF FEWHVTYGNI SPLGVAQQGI LINGKFPGPD IISITNDNLI INVFNHLDEP FLLSWNGIRN WKNSFQDGVY
101: GTMCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GGIRISSRAL IPVPFPTPAD DYTLLVGDWY KTNHKDLKAQ LDNGGKLPLP DGILINGRSS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHTMKLVEVE GRYTIQNLFS SLDVHVGQSY SVLITADQPA KDYYVVVSSR FTSKILTTTG VLHYSNSVAP
301: VSGPIPDGPI KLSWSFNQAR AIRTNLTASG PRPNPQGSYR YGVINITRTI RLANNLGHIE GKQRYAVNSA SFYPADTPLK LVDYFKIDGV YKPGSISDQP
401: TNGAIFPTTS VMQADFRAFV EVIFENSEDI VQSWHLDGYS FYVVGMELGK WSPASRKVYN LNDAILRCTI QVYPRSWTAI YIALDNVGMW NMRSEIWERQ
501: YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRASSSHR
101: GTMCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GGIRISSRAL IPVPFPTPAD DYTLLVGDWY KTNHKDLKAQ LDNGGKLPLP DGILINGRSS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHTMKLVEVE GRYTIQNLFS SLDVHVGQSY SVLITADQPA KDYYVVVSSR FTSKILTTTG VLHYSNSVAP
301: VSGPIPDGPI KLSWSFNQAR AIRTNLTASG PRPNPQGSYR YGVINITRTI RLANNLGHIE GKQRYAVNSA SFYPADTPLK LVDYFKIDGV YKPGSISDQP
401: TNGAIFPTTS VMQADFRAFV EVIFENSEDI VQSWHLDGYS FYVVGMELGK WSPASRKVYN LNDAILRCTI QVYPRSWTAI YIALDNVGMW NMRSEIWERQ
501: YLGQQFYMRV YTTSTSLRDE YLIPKNALLC GRASSSHR
Arabidopsis Description
sks7SKU5 similar 7 [Source:UniProtKB/TrEMBL;Acc:Q9SFF1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.