Factsheet for Os04t0561900-01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G423900.1	Wheat	extracellular	76.71	76.3
TraesCS2D01G403100.1	Wheat	extracellular	76.53	75.99
EES12655	Sorghum	extracellular	75.99	72.84
Zm00001d026132_P001	Maize	vacuole	74.37	71.65
HORVU2Hr1G096250.3	Barley	extracellular	37.0	65.71
TraesCS2A01G406200.3	Wheat	plasma membrane	70.22	64.3
Os07t0510900-01	Rice	extracellular, peroxisome	53.25	63.58
Os06t0678800-01	Rice	extracellular	61.37	62.73
Os07t0119400-01	Rice	extracellular	54.15	55.05
Os01t0816700-01	Rice	plasma membrane	50.54	50.63
Os07t0510833-00	Rice	extracellular	9.03	50.0
Os10t0508000-00	Rice	extracellular	29.6	48.81
Os08t0154250-01	Rice	plasma membrane	49.28	45.5
Os06t0104300-01	Rice	extracellular	48.01	44.86
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	46.21	43.17
Os05t0485800-00	Rice	plasma membrane	37.55	30.54

Protein Annotations

Gene3D:2.60.40.420	EntrezGene:4336660	MapMan:50.1.10	EMBL:AK070790	EMBL:AK071517	ProteinID:BAF15469.1
ProteinID:BAS90482.1	ProteinID:CAE01850.2	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506
GO:GO:0016491	GO:GO:0016722	GO:GO:0030312	GO:GO:0055114	InterPro:IPR008972	EnsemblPlantsGene:Os04g0561900
EnsemblPlants:Os04t0561900-01	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF64
UniProt:Q7XSQ1	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000021C76A	RefSeq:XP_015634540.1
SEG:seg	:	:	:	:	:

Description

rice microspore-preferred 2Cupredoxin domain containing protein. (Os04t0561900-01)

Coordinates

chr4:-:28127062..28130289

Molecular Weight (calculated)

61068.1 Da

IEP (calculated)

9.239

GRAVY (calculated)

-0.290

Length

554 amino acids

Sequence
(BLAST)

001: MSSRRSMGAL AAVCVCMFVF VSSARAEDPY RFFDWEVTTG NINPLGVQQQ GILINGQFPG PEIDCQTNDN LIVNVHNRLS EPFLLSWNGL QHRKNSWQDG
101: VSGTNCPIPP GQNFTYQMQA KDQIGSFFYF PSLAFHKAAG GFGAIRIRSR PLIPVPFDPP AGEYTMLIGD WYKTSHKALQ AMLDSGKQLP SPDGILINGK
201: GPNGASFTVE QGKTYRLRVS NVGLQSTLNL RIQDHNMTLV EVEGTHTVQN TYSSLYVHAG QSLSVLFTAN RPPGVYQITV STRFAKRALN SSAVLRYAGS
301: SATISSPPPP AGLADDIDFS LDQARSIRTN LTASGPRPNP QGSYHYGSIN VTRTIRLANS AGRVAGKQRY AVNGVSFVEA DTPLKLADYY RISDVFRLGG
401: IPDAPPAGAA AAPRSEAAVM DSDYRSFLEI VFENSEDSVQ IWHLDGYSLF VVGMDRGVWS EQSRKSYNLV DAVSRCTVQV YPRAWTAVLV ALDNVGMWNL
501: RSEDWARRYQ GQQFYLRVYT PSHSFRDELP IPSNALRCGR ATNASGRSRT LSRY

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.