Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G423900.1 | Wheat | extracellular | 94.98 | 95.15 |
| TraesCS2A01G406200.3 | Wheat | plasma membrane | 87.46 | 80.66 |
| HORVU2Hr1G096250.3 | Barley | extracellular | 44.09 | 78.85 |
| Os04t0561900-01 | Rice | vacuole | 75.99 | 76.53 |
| EES12655 | Sorghum | extracellular | 75.09 | 72.49 |
| Zm00001d026132_P001 | Maize | vacuole | 71.68 | 69.57 |
| TraesCS7D01G447200.1 | Wheat | extracellular | 60.39 | 62.18 |
| TraesCS2D01G230800.1 | Wheat | extracellular | 60.04 | 61.47 |
| TraesCS2D01G259100.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 53.94 | 55.33 |
| TraesCS3D01G171100.1 | Wheat | mitochondrion | 50.0 | 49.73 |
| TraesCS3D01G333700.1 | Wheat | extracellular, golgi, vacuole | 49.28 | 49.46 |
| TraesCS1D01G303600.1 | Wheat | extracellular | 49.1 | 49.02 |
| TraesCS1D01G162800.1 | Wheat | extracellular, golgi | 48.75 | 45.33 |
| TraesCS7D01G297700.1 | Wheat | extracellular | 46.42 | 43.38 |
| TraesCS3D01G086400.1 | Wheat | extracellular | 46.24 | 43.22 |
| TraesCS7D01G008600.1 | Wheat | golgi | 45.88 | 42.81 |
| TraesCS1D01G295000.2 | Wheat | extracellular, mitochondrion, plasma membrane, plastid | 12.72 | 31.7 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:CuRO_1_AAO-like |
| InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR008972 | PFAM:PF00394 | PFAM:PF07731 |
| PFAM:PF07732 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF64 | SUPFAM:SSF49503 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2D01G403100 |
| EnsemblPlants:TraesCS2D01G403100.1 | TIGR:cd13846 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:518034310..518037390
Molecular Weight (calculated)
60937.7 Da
IEP (calculated)
8.605
GRAVY (calculated)
-0.268
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASAAARVV VALACVFSLV FSAQAEAPYR FFDWEVSYGD VNPLGGVPQQ GILINGQFPG PQIDCQTNDN LVINVRNRLP EPFLLSWNGI QHRKNSWQDG
101: VSGTNCPIPP GQNYTYHMQA KDQIGSFFYF PSLAFHKAAG GFGAIRINSR PRIPIPFPPP ADEFTVLIGD WYNTTHKALQ AMLDDGKLLP SPDAILINGK
201: GPGRANFTVE QGKTYRLRVS NVGLRSTLNF MIQDHNVTLV EVEGTHTVQN TYTSLDVHAG QSLSVLFTAD RPAGGYHIAV SSRFTNQTLN STAVLRYAGS
301: TGFSGPPRAL NQSDVDFSLN QARSIRTNLT ASGPRPNPQG SYHYGSINVS RTIRLANSAG QVGGKPRYGV NGVSYVDADT PLKLADYYNI SGVYRMGAIP
401: DAPAASHSGT QNGTGADAAL KNATAVMDSD HRSFVEVVFE NSEDSLQSWH LDGYSVFVAG MDKGAWSEQS RKGYNLVDAV TRCTVQVYPR GWTAIFIALD
501: NVGMWNVRSE DWVRRYLGQQ FYLRVYTPTH SVRDELPVPT NAILCGRAAN KSRLPVSQ
101: VSGTNCPIPP GQNYTYHMQA KDQIGSFFYF PSLAFHKAAG GFGAIRINSR PRIPIPFPPP ADEFTVLIGD WYNTTHKALQ AMLDDGKLLP SPDAILINGK
201: GPGRANFTVE QGKTYRLRVS NVGLRSTLNF MIQDHNVTLV EVEGTHTVQN TYTSLDVHAG QSLSVLFTAD RPAGGYHIAV SSRFTNQTLN STAVLRYAGS
301: TGFSGPPRAL NQSDVDFSLN QARSIRTNLT ASGPRPNPQG SYHYGSINVS RTIRLANSAG QVGGKPRYGV NGVSYVDADT PLKLADYYNI SGVYRMGAIP
401: DAPAASHSGT QNGTGADAAL KNATAVMDSD HRSFVEVVFE NSEDSLQSWH LDGYSVFVAG MDKGAWSEQS RKGYNLVDAV TRCTVQVYPR GWTAIFIALD
501: NVGMWNVRSE DWVRRYLGQQ FYLRVYTPTH SVRDELPVPT NAILCGRAAN KSRLPVSQ
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.