Factsheet for Os06t0104300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

plasma membrane: 18260611
extracellular: 19038476
extracellular: 19226311
plasma membrane: 19502382
extracellular: 24083427
extracellular: 26194822
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 26194822 doi

WK Cho, TK Hyun, D Kumar, Y Rim, XY Chen, Y Jo, S Kim, KW Lee, ZY Park, WJ Lucas, JY Kim

Department of Industrial Plant Science and Technology, College of Agricultural, Life and Environmental Sciences, Chungbuk National University, Cheongju 361-763, Korea., Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea., Department of Plant Biology, University of California, Davis, CA 95616, USA., Division of Applied Life Science (BK21plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89036	Sorghum	plasma membrane	90.89	91.36
Zm00001d045599_P001	Maize	plasma membrane	90.39	90.54
TraesCS7A01G008900.1	Wheat	golgi	87.35	87.06
HORVU7Hr1G000150.1	Barley	extracellular	86.85	86.41
TraesCS7D01G008600.1	Wheat	golgi	86.51	85.79
TraesCS4A01G486100.1	Wheat	golgi	86.0	85.28
GSMUA_Achr1P20210_001	Banana	cytosol	52.11	76.49
GSMUA_Achr4P04820_001	Banana	cytosol	73.19	74.83
GSMUA_Achr6P36830_001	Banana	plasma membrane	78.08	74.32
Os10t0508000-00	Rice	extracellular	41.48	73.21
Os08t0154250-01	Rice	plasma membrane	66.78	66.0
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	60.37	60.37
Os07t0510900-01	Rice	extracellular, peroxisome	38.79	49.57
Os06t0678800-01	Rice	extracellular	44.18	48.34
Os04t0561900-01	Rice	vacuole	44.86	48.01
Os07t0119400-01	Rice	extracellular	43.17	46.97
Os01t0816700-01	Rice	plasma membrane	42.83	45.93
Os07t0510833-00	Rice	extracellular	6.24	37.0
Os05t0485800-00	Rice	plasma membrane	33.73	29.37

Protein Annotations

Gene3D:2.60.40.420	EntrezGene:4339854	MapMan:50.1.10	EMBL:AK102494	ProteinID:BAA90610.1	ProteinID:BAF18464.1
ProteinID:BAS95732.1	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin
ProteinID:EAZ35538.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016722	GO:GO:0055114	InterPro:IPR008972	EnsemblPlantsGene:Os06g0104300
EnsemblPlants:Os06t0104300-01	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF124
UniProt:Q9LX04	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A4861	RefSeq:XP_015641204.1
SEG:seg	:	:	:	:	:

Description

Similar to Pectinesterase-like protein. (Os06t0104300-01)

Coordinates

chr6:-:297316..301778

Molecular Weight (calculated)

65753.9 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.240

Length

593 amino acids

Sequence
(BLAST)

001: MAAAAAALLA FVAVAGALVA QATDPYVFFD WDVSFITASP LGLPQKVIAI NKQFPGPVMN LTTNYNVVVN VLNSLDEPLL ITWDGIQQRK NCWQDGVLGT
101: TCPIPPGWNW TYNFQVKDQI GSFFYFPPLS LQRAAGGFGG ITVNNRAVIS VPFDTPDGDI TLFIGDWYKK SHTDLRKMLD DGKELGMPDG VLMNGKGPYR
201: YNDSLVPAGI EHETIKVEPG KTYRFRVHNV GISTSLNFRI QNHNLALVET EGSYTMKQNF TNLDIHVGQS YSFLITMDQN ASSDYYIVAS ARFVNESLWT
301: KVTGVAILQY SNSKGKASGP LPDPPNDEYD KTFSMNQARS IRMNVSTGAA RPNPQGSFHY GSINVSQVYK LRNEPPVTIN GKKRTTLSGI SFSPPDTPMR
401: LADLYDKKGV YTLDFPTMPI DGPPVMKTSV INSTYKNFLE IVFQNNDTKV QTYHIDGYAF WVVGMDYGEW TENSRGTYNK WDGVSRCTTQ VFPGAWTAVM
501: LSLDSPGFWN VRTENLDTWY LGQETYIRVV DPDGGYNVTE MVAPDNMLYC GLLKDKQKAQ KPHGSSSSSS SAASPNRYWL AVVVSLVAAV FVQ

Best Arabidopsis Sequence Match ( AT4G12420.1 )
(BLAST)

001: MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC
101: PIPPKWNWTY EFQVKDQIGS FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG KDLGMPDGVL INGKGPYRYN
201: DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301: TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA
401: DKLKVKDVYK LDFPKRPLTG PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD GIARSTIQVY PGAWSAILIS
501: LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH

Arabidopsis Description

SKU5Monocopper oxidase-like protein SKU5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.