Factsheet for Os01t0100400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 6
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G085900.1	Wheat	extracellular	80.61	80.61
TraesCS3B01G101500.1	Wheat	extracellular	80.94	80.54
EER92264	Sorghum	extracellular	79.6	80.0
TraesCS3D01G086400.1	Wheat	extracellular	80.44	79.9
HORVU3Hr1G015510.2	Barley	cytosol	47.55	78.99
TraesCS3B01G101200.1	Wheat	extracellular	79.09	73.51
GSMUA_Achr3P17240_001	Banana	cytosol	69.98	70.1
Zm00001d029193_P001	Maize	mitochondrion	79.93	68.6
VIT_07s0141g00540.t01	Wine grape	extracellular	68.47	68.24
PGSC0003DMT400074313	Potato	extracellular	66.95	68.1
Solyc09g055930.2.1	Tomato	extracellular	66.1	67.12
KRH46577	Soybean	mitochondrion	69.31	64.52
CDY48757	Canola	extracellular, plasma membrane, vacuole	64.08	63.87
CDY05676	Canola	extracellular, plasma membrane, vacuole	63.91	63.59
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	63.74	63.53
Os10t0508000-00	Rice	extracellular	35.92	63.39
Os06t0104300-01	Rice	extracellular	60.37	60.37
AT5G48450.1	Thale cress	extracellular	62.06	59.26
Os08t0154250-01	Rice	plasma membrane	58.18	57.5
Os06t0678800-01	Rice	extracellular	44.01	48.16
Os07t0510900-01	Rice	extracellular, peroxisome	37.27	47.63
Os07t0119400-01	Rice	extracellular	43.51	47.34
Os04t0561900-01	Rice	vacuole	43.17	46.21
Os01t0816700-01	Rice	plasma membrane	41.32	44.3
Os07t0510833-00	Rice	extracellular	5.9	35.0
Os05t0485800-00	Rice	plasma membrane	30.86	26.87

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EMBL:AK101455	ProteinID:BAD45494.1	ProteinID:BAE79748.1	ProteinID:BAF03649.1
ProteinID:BAS69911.1	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0016020	GO:GO:0016491	GO:GO:0016722
GO:GO:0055114	InterPro:IPR008972	EnsemblPlantsGene:Os01g0100400	EnsemblPlants:Os01t0100400-01	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	UniProt:Q655L8	SUPFAM:SSF49503	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000043A2EC	SEG:seg	:	:	:

Description

Similar to Pectinesterase-like protein. (Os01t0100400-01)

Coordinates

chr1:+:12721..15685

Molecular Weight (calculated)

65866.9 Da

IEP (calculated)

5.608

GRAVY (calculated)

-0.174

Length

593 amino acids

Sequence
(BLAST)

001: MDSIRRRSAG GILGILFLVL LRWAGAGDPY AYYEWEVSYV WGAPLGGVKK QEAIGINGQL PGPALNVTTN WNLVVNVRNG LDEPLLLTWH GVQQRKSPWQ
101: DGVGGTNCGI PPGWNWTYQF QVKDQVGSFF YAPSTALHRA AGGYGAITIN NRDVIPLPFP LPDGGDITLF LADWYARDHR ALRRALDAGD PLGPPDGVLI
201: NALGPYRYND TLVPPGVTYE RINVDPGRTY RLRVHNVGVA TSLNFRIQGH NLLLVEAEGS YTSQQNYTNM DIHVGQSYSF LLTMDQNAST DYYVVASARF
301: VPDADKLTGV AILHYSNSQG PPSGSLPDAP DDQYDTAFSI NQARSIRWNV TASGARPNPQ GSFHYGDITV TDVYLLQSMP PELIDGQMRA TLNGISYIAP
401: STPLMLAQLF NVPGVYKLDF PNRPMNRLPK LDTSIINGTY KGFMEIIFQN NATSVQSYHL DGYAFFVVGM DYGLWTDNSR GTYNKWDGVA RSTIQVFPGA
501: WTAVLVFLDN AGIWNLRVEN LDAWYLGQEV YISVVNPEDS SNKTVLPLPD NAIFCGALSS LQKEQSHRFQ YSEASQITQL WKMVFFMAWL ALW

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.