Factsheet for Bra039389.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43352	Canola	extracellular, plasma membrane	91.35	93.32
CDY24188	Canola	endoplasmic reticulum, extracellular, plasma membrane	98.65	93.27
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	97.12	91.49
Bra001504.1-P	Field mustard	extracellular	94.81	89.47
AT3G13400.1	Thale cress	extracellular, plasma membrane	94.62	89.29
Bra030850.1-P	Field mustard	plasma membrane	87.69	83.06
Bra038001.1-P	Field mustard	extracellular, vacuole	75.77	70.99
Bra001503.1-P	Field mustard	extracellular, plasma membrane	75.0	70.27
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	74.81	70.22
KRH31599	Soybean	extracellular	71.92	67.75
Bra030849.1-P	Field mustard	cytosol	20.96	66.06
Bra034680.1-P	Field mustard	extracellular, plasma membrane	69.81	65.64
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	69.81	65.52
KRH50513	Soybean	vacuole	69.23	65.45
GSMUA_Achr11P...	Banana	vacuole	66.15	65.28
KRG89471	Soybean	mitochondrion	69.81	65.17
GSMUA_Achr8P01580_001	Banana	extracellular	64.42	64.92
GSMUA_Achr5P27810_001	Banana	extracellular	65.77	64.9
VIT_00s1309g00010.t01	Wine grape	vacuole	68.27	64.55
VIT_00s1643g00010.t01	Wine grape	vacuole	68.27	64.55
GSMUA_Achr9P04930_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	64.42	63.93
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	67.69	63.77
GSMUA_Achr8P09380_001	Banana	extracellular	64.23	63.62
GSMUA_Achr11P...	Banana	extracellular	64.23	63.14
GSMUA_AchrUn_...	Banana	extracellular	63.65	62.81
GSMUA_Achr10P...	Banana	extracellular, golgi	66.35	61.17
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	64.42	60.25
GSMUA_Achr9P16870_001	Banana	extracellular, plasma membrane, vacuole	64.04	59.78
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	64.04	59.68
PGSC0003DMT400016672	Potato	endoplasmic reticulum	63.46	59.57
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	63.46	59.57
Solyc03g063150.2.1	Tomato	unclear	63.65	59.53
Solyc11g008860.1.1	Tomato	extracellular	63.27	59.28
Solyc05g055710.2.1	Tomato	extracellular	51.35	58.81
HORVU4Hr1G048550.1	Barley	cytosol, extracellular	7.12	58.73
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	62.88	57.67
TraesCS1B01G314600.1	Wheat	plasma membrane	61.92	57.6
TraesCS1D01G303600.1	Wheat	extracellular	61.92	57.6
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	61.54	57.45
HORVU1Hr1G069130.1	Barley	extracellular, golgi, plasma membrane	61.73	57.32
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	61.35	57.27
TraesCS1A01G304100.1	Wheat	extracellular, golgi, plasma membrane	61.54	57.25
PGSC0003DMT400060352	Potato	extracellular	60.0	56.52
Os01t0816700-01	Rice	plasma membrane	59.42	55.88
EES19711	Sorghum	extracellular	59.62	55.46
Zm00001d038521_P001	Maize	extracellular, plasma membrane, vacuole	59.62	55.46
EES01652	Sorghum	extracellular, golgi, vacuole	59.42	55.38
Zm00001d043090_P001	Maize	vacuole	59.04	55.12
Zm00001d012524_P001	Maize	vacuole	59.04	54.92
Zm00001d010630_P003	Maize	extracellular, golgi, vacuole	60.0	54.74
GSMUA_Achr3P09610_001	Banana	plastid	63.85	54.34
HORVU3Hr1G080360.1	Barley	extracellular, golgi, vacuole	57.88	54.04
TraesCS3D01G333700.1	Wheat	extracellular, golgi, vacuole	57.69	53.96
TraesCS3A01G340200.1	Wheat	extracellular, golgi, vacuole	57.31	53.79
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	57.5	53.78
GSMUA_Achr5P07530_001	Banana	extracellular, golgi, vacuole	62.88	52.32
Bra015781.1-P	Field mustard	extracellular	53.46	51.39
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	53.85	51.38
Bra034943.1-P	Field mustard	extracellular	53.27	51.11
Bra037137.1-P	Field mustard	extracellular	53.08	51.02
Bra036800.1-P	Field mustard	extracellular	52.88	50.83
Bra008241.1-P	Field mustard	extracellular	53.08	50.37
Bra025818.1-P	Field mustard	extracellular	51.35	48.46
Bra032154.1-P	Field mustard	extracellular	50.0	48.24
Bra013582.1-P	Field mustard	extracellular	50.0	48.06
Bra017796.1-P	Field mustard	extracellular	49.42	47.59
Bra002824.1-P	Field mustard	cytosol	9.62	47.17
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	42.88	45.23
Bra022513.1-P	Field mustard	extracellular	46.54	44.08
Zm00001d047156_P002	Maize	cytosol	16.54	42.57
Bra018479.1-P	Field mustard	plasma membrane	47.88	42.49
Bra000773.1-P	Field mustard	extracellular	47.5	42.22
Bra022551.1-P	Field mustard	plasma membrane	48.46	42.21
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.27	42.18
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	51.35	41.78
Solyc05g055720.1.1	Tomato	nucleus	7.12	41.11
Bra034914.1-P	Field mustard	extracellular	6.15	41.03
Bra029171.1-P	Field mustard	extracellular	45.58	40.51
Bra013877.1-P	Field mustard	plasma membrane	45.96	40.03
Zm00001d037444_P001	Maize	mitochondrion	19.42	37.69
Zm00001d004806_P001	Maize	plastid	5.38	32.94
Os05t0485800-00	Rice	plasma membrane	40.58	30.98
Bra011721.1-P	Field mustard	mitochondrion, plastid	49.04	21.5

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra039389	EnsemblPlants:Bra039389.1	EnsemblPlants:Bra039389.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_2_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR008972	UniProt:M4FE68	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709
PANTHER:PTHR11709:SF27	SUPFAM:SSF49503	SignalP:SignalP-noTM	UniParc:UPI000253E942	SEG:seg	:

Description

AT3G13400 (E=2e-287) sks13 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase

Coordinates

chrScaffold000164:+:234245..236500

Molecular Weight (calculated)

58482.6 Da

IEP (calculated)

9.336

GRAVY (calculated)

-0.285

Length

520 amino acids

Sequence
(BLAST)

001: MQGGRLLTVF VCLVSTVALV NAGDPYFYYT WNVTYGTVAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNY TYHFQPKDQI GSYFYYPSTA LHRFSGGFGG LRFNSRLLIP VPYADPEDDH TILINDWYTK SHTALKTFLD SGRTLGSPDG VLINGKSGKV
201: GGQNKPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQEAKSYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQPSNVLP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVDGKVRFG LNGVSHVDTE TPLKLAEYFE MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEIV FENHEKSMQS FHLDGYSFFS VASEPGTWTP EKRNNYNLLD AVSRHTVQVF PKSWSAILLT FDNAGMWNIK
501: SENWERRYLG QQMYVSVLSP

Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)

001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I

Arabidopsis Description

sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.