Factsheet for PGSC0003DMT400042483

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
vacuole 5
extracellular 6
endoplasmic reticulum 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g080670.2.1	Tomato	nucleus	97.81	97.63
GSMUA_Achr5P26550_001	Banana	cytosol	19.2	80.77
VIT_10s0116g01610.t01	Wine grape	extracellular	77.7	78.7
KRH51114	Soybean	endoplasmic reticulum	75.14	75.14
KRH02049	Soybean	nucleus	74.77	74.5
AT4G22010.1	Thale cress	extracellular	72.21	73.01
Os06t0678800-01	Rice	extracellular	72.21	72.88
CDX79120	Canola	extracellular	71.85	72.64
CDX82897	Canola	extracellular	71.85	72.64
Bra013582.1-P	Field mustard	extracellular	71.48	72.27
EER90222	Sorghum	extracellular	71.48	71.61
PGSC0003DMT400074510	Potato	extracellular	70.75	71.53
Zm00001d014366_P002	Maize	extracellular	71.48	71.35
TraesCS7B01G359700.1	Wheat	extracellular	70.57	71.22
TraesCS7D01G447200.1	Wheat	extracellular	70.38	71.03
HORVU7Hr1G105620.1	Barley	extracellular	70.2	70.85
TraesCS7A01G459400.1	Wheat	extracellular	70.38	70.77
Os07t0510900-01	Rice	extracellular, peroxisome	59.78	70.47
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	61.79	70.42
GSMUA_Achr5P26560_001	Banana	extracellular	44.42	70.03
TraesCS2A01G224600.1	Wheat	extracellular	69.65	69.91
TraesCS2D01G230800.1	Wheat	extracellular	69.47	69.72
TraesCS2B01G274800.1	Wheat	vacuole	69.29	69.54
EER97278	Sorghum	extracellular, golgi	69.65	69.53
HORVU2Hr1G047260.1	Barley	extracellular, golgi, vacuole	69.1	68.6
PGSC0003DMT400025805	Potato	extracellular	67.09	67.96
PGSC0003DMT400048000	Potato	extracellular	64.17	67.24
Zm00001d021599_P002	Maize	extracellular, plasma membrane, vacuole	68.19	66.85
KRH11453	Soybean	extracellular	54.11	64.91
PGSC0003DMT400075398	Potato	extracellular	63.8	64.15
PGSC0003DMT400075620	Potato	extracellular	62.71	63.17
PGSC0003DMT400002004	Potato	extracellular	59.96	60.85
PGSC0003DMT400025973	Potato	extracellular	59.78	57.47
Os07t0510833-00	Rice	extracellular	9.69	53.0
PGSC0003DMT400060352	Potato	extracellular	51.92	51.45
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	51.19	50.27
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	51.19	50.18
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	50.82	50.0
PGSC0003DMT400016672	Potato	endoplasmic reticulum	50.46	49.82
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	51.37	49.56
PGSC0003DMT400074313	Potato	extracellular	49.54	46.48
PGSC0003DMT400025541	Potato	extracellular	37.11	46.14
PGSC0003DMT400035984	Potato	plasma membrane	45.89	42.33
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	46.07	42.14
CDX76855	Canola	cytoskeleton, cytosol, extracellular	16.09	35.34

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like
InterPro:CuRO_3_AO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009506	GO:GO:0016020	GO:GO:0016491	GO:GO:0030312	GO:GO:0055114	InterPro:IPR008972
UniProt:M1BD41	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG401016475	PGSC:PGSC0003DMG401016475
EnsemblPlants:PGSC0003DMT400042483	PANTHER:PTHR11709	PANTHER:PTHR11709:SF11	SUPFAM:SSF49503	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0002954B77	SEG:seg	:	:	:	:

Description

Multicopper oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG401016475]

Coordinates

chr2:+:36463203..36467130

Molecular Weight (calculated)

61913.6 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.305

Length

547 amino acids

Sequence
(BLAST)

001: MEKSINVHYS FIFTIILVLV TTLQTVYAGN PYRYYTWKIT YGNIYPLGVK QQGILINGQF PGPQIDCVTN DNLIISVYNY LSEPFLISWN GIQQRRNSWQ
101: DGVYGSTCPI LPGKNFTYTL QAKDQIGSYF YFPSLAMHKA AGGYGAIRVY SRPRIPVPFA PPAHDFTVLA GDLYKRSHRQ LKYILDSGHD LPLPDGLIIN
201: GRGWNGYTFT VDQGKTYRFR ISNVGIATSI NFRIQGHTMK LVEVEGSHTL QTTYTSLDIH LGQSYSVLVT ANQPPKDYYV VVSSRFTTRV LTTTAVLHYS
301: NSWTKVSGPP PGGPTTQINW SLYQARSIRW NLTASGPRPN PQGSYHYGLI KPSRTIMLAN SAPYINGKQR YAVNSVSYTD PDTPLKLADH FNIGGVFNLG
401: SISDQPYNGN AYIGTPVMSA NFRSYVEIIF QNWENTVQSW HIDGYSFFVV GMDGGQWTPS SRAHYNLRDT IARCTVQVYP KSWTAIYMAL DNVGMWNIRS
501: ENWSRRYLGQ QFYLRVYSPA NSWRDELPIP KNAILCGKAR GHRTRPL

Best Arabidopsis Sequence Match ( AT4G22010.1 )
(BLAST)

001: MRGSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA ITNDNIIISV FNYLKEPFLI SWNGVQQRKN SWQDGVVGTT
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F

Arabidopsis Description

sks4At4g22010 [Source:UniProtKB/TrEMBL;Acc:O65449]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.