Factsheet for PGSC0003DMT400002004

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065170.2.1	Tomato	nucleus	98.14	98.14
PGSC0003DMT400025973	Potato	extracellular	83.12	78.73
KRH76937	Soybean	endoplasmic reticulum	75.51	75.37
VIT_00s0253g00040.t01	Wine grape	extracellular	74.58	75.0
KRH28523	Soybean	extracellular	74.4	74.67
KRH57764	Soybean	cytosol, extracellular, plastid	57.7	73.18
KRH04707	Soybean	endoplasmic reticulum	72.91	72.64
GSMUA_Achr6P34670_001	Banana	extracellular	71.24	72.18
Bra037137.1-P	Field mustard	extracellular	71.43	71.16
CDY18626	Canola	extracellular	71.43	71.16
CDX81353	Canola	extracellular	71.06	70.79
CDY68812	Canola	cytosol, peroxisome	58.44	70.63
CDY43557	Canola	extracellular	69.57	69.32
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	69.94	69.17
Bra036800.1-P	Field mustard	extracellular	69.39	69.13
CDY01453	Canola	extracellular, golgi	69.57	68.81
AT5G66920.1	Thale cress	extracellular, plasma membrane, vacuole	69.57	68.68
GSMUA_Achr10P...	Banana	extracellular	69.76	68.61
CDY12788	Canola	extracellular	68.83	68.32
HORVU2Hr1G062590.3	Barley	extracellular	63.45	63.33
TraesCS2D01G259100.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	63.64	63.05
TraesCS2B01G277200.1	Wheat	extracellular	63.82	62.89
Os07t0119400-01	Rice	extracellular	63.27	62.57
TraesCS2A01G264900.1	Wheat	extracellular	63.08	62.5
OQU88350	Sorghum	extracellular	62.15	60.58
PGSC0003DMT400048000	Potato	extracellular	58.63	60.54
PGSC0003DMT400042483	Potato	extracellular	60.85	59.96
PGSC0003DMT400025805	Potato	extracellular	58.63	58.52
PGSC0003DMT400074510	Potato	extracellular	58.63	58.41
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	51.76	58.12
Zm00001d018696_P001	Maize	extracellular	62.15	57.56
PGSC0003DMT400075398	Potato	extracellular	57.7	57.17
PGSC0003DMT400075620	Potato	extracellular	56.22	55.8
PGSC0003DMT400060352	Potato	extracellular	51.76	50.54
PGSC0003DMT400002554	Potato	endoplasmic reticulum, extracellular, golgi	52.13	50.54
PGSC0003DMT400082031	Potato	extracellular, plasma membrane, vacuole	51.76	50.09
PGSC0003DMT400010905	Potato	extracellular, plasma membrane	52.13	49.56
PGSC0003DMT400016672	Potato	endoplasmic reticulum	50.65	49.28
PGSC0003DMT400041845	Potato	extracellular, plasma membrane, vacuole	50.83	49.1
PGSC0003DMT400074313	Potato	extracellular	51.76	47.86
PGSC0003DMT400025541	Potato	extracellular	36.36	44.55
PGSC0003DMT400035984	Potato	plasma membrane	48.42	44.01
PGSC0003DMT400012216	Potato	extracellular, plasma membrane, vacuole	47.12	42.47

Protein Annotations

EntrezGene:102595490	Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M0ZJH1	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	EnsemblPlantsGene:PGSC0003DMG400000761	PGSC:PGSC0003DMG400000761	EnsemblPlants:PGSC0003DMT400002004	PANTHER:PTHR11709
PANTHER:PTHR11709:SF26	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029498C8	RefSeq:XP_006360232.1
SEG:seg	:	:	:	:	:

Description

Multicopper oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400000761]

Coordinates

chr2:+:23796212..23800871

Molecular Weight (calculated)

60211.0 Da

IEP (calculated)

9.517

GRAVY (calculated)

-0.194

Length

539 amino acids

Sequence
(BLAST)

001: MGKLALLHLL CGILIFWAVS VIKAEDPYKY FTWTATYGMA SLLGTPQQVI LINGQFPGPR LDLVTNDNIV LNLINKLDEP LLLTWNGIKQ RKNSWQDGVL
101: GTNCPIPPNR NYIYKFQPKD QIGSYTYFPS TQLHRAAGGF GVLNVYARSV IPVPYAKPAG DFSLLIGDWY KTSHKALRQI LDSGKSLPFP DGLLINGQKQ
201: STFTGDQGKT YMFRISNVGL KTTINFRIQG HKMKLVEVEG SHVIQNLYDS FDVHVGQSLS ILVTLDQSPK DYYIVASTRF TTTVLTSTSV LHYTNSQTPV
301: SGPVPAGPVN QFQWSLMQAR TIRWNLTSNA ARPNPQGSFH YGKITPSRTI LLANSAPLIN GKQRYAVNGI SYIHPDTPLK LADHFNIPGV FTLDSIRSAP
401: TADSPHLATA VLPSSLHEFL EIVFQNNEDT MQSWHLDGYD FWVVGFGSGT WTQASRKGYN LVDALTRHTT QVYPKSWTAI FVSLDNQGMW NLRSAMWDRQ
501: YLGQQAYLRV YNPTSSLANE YDIPTNALLC GKADALRHP

Best Arabidopsis Sequence Match ( AT5G66920.1 )
(BLAST)

001: MKMASRKTTS LLNHLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK
101: NSWQDGVLGT NCPIQPNSNF TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPLPTADF TLLVGDWFKT NHKTLQQRLD SGGVLPFPDG
201: MLINGQTQST FSGDQGKTYM LRISNVGLSS TFNFRIQGHT MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YIVASTRFIR SKLSVMGLLR
301: YSNSRVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG MISPTKTFVF SNSAPLINGK QRYAVNGVSY VKSETPLKLA DHFGISGVFS
401: TNAIQSVPSN SPPTVATSVV QTSHHDFLEI VFQNNEKSMQ SWHLDGYDFW VVGFGSGQWT PAKRSLHNLV DALTRHTTQV YPESWTTILV SLDNQGMWNM
501: RSAIWERQYS GQQFYLKVWN SVQSLANEYN PPDNLQLCGK AVGRHV

Arabidopsis Description

sks17Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.