CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014366_P002	Maize	extracellular	95.6	95.26
Os06t0678800-01	Rice	extracellular	89.19	89.85
TraesCS7B01G359700.1	Wheat	extracellular	87.73	88.38
HORVU7Hr1G105620.1	Barley	extracellular	87.36	88.01
TraesCS7A01G459400.1	Wheat	extracellular	87.36	87.68
TraesCS7D01G447200.1	Wheat	extracellular	86.26	86.9
VIT_10s0116g01600.t01	Wine grape	extracellular, mitochondrion	17.95	79.67
GSMUA_Achr8P15900_001	Banana	extracellular	78.02	78.45
Solyc02g080700.1.1	Tomato	cytosol	14.1	77.78
VIT_12s0059g00770.t01	Wine grape	extracellular	74.91	75.6
Solyc07g052240.2.1	Tomato	nucleus	74.54	74.95
VIT_10s0116g01610.t01	Wine grape	extracellular	73.81	74.63
PGSC0003DMT400074510	Potato	extracellular	73.44	74.12
KRH26769	Soybean	endoplasmic reticulum	72.34	73.69
EER97278	Sorghum	extracellular, golgi	72.53	72.26
Solyc02g080670.2.1	Tomato	nucleus	72.34	72.08
PGSC0003DMT400074506	Potato	cytosol, extracellular, nucleus	63.19	71.88
PGSC0003DMT400042483	Potato	extracellular	71.61	71.48
KRH25361	Soybean	mitochondrion, nucleus	70.15	71.32
Solyc07g052230.2.1	Tomato	extracellular	69.78	70.95
KRH56153	Soybean	mitochondrion, nucleus	69.78	70.95
KRH51114	Soybean	endoplasmic reticulum	69.78	69.65
AT4G22010.1	Thale cress	extracellular	68.86	69.5
KRH02049	Soybean	nucleus	69.41	69.03
CDX82897	Canola	extracellular	67.95	68.58
CDX79120	Canola	extracellular	67.77	68.39
Bra013582.1-P	Field mustard	extracellular	67.22	67.84
KRH11453	Soybean	extracellular	50.92	60.96
EES12655	Sorghum	extracellular	60.44	57.09
OQU88350	Sorghum	extracellular	55.86	55.15
EES19711	Sorghum	extracellular	50.73	49.55
EES01652	Sorghum	extracellular, golgi, vacuole	49.27	48.21
EER89036	Sorghum	plasma membrane	50.0	46.27
KXG24449	Sorghum	cytosol, nucleus, vacuole	42.49	45.94
EER92264	Sorghum	extracellular	49.45	45.76
EER93966	Sorghum	extracellular	50.18	45.74
CDX76855	Canola	cytoskeleton, cytosol, extracellular	16.3	35.74

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EntrezGene:8083212	UniProt:C5Z7V0	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	EnsemblPlants:EER90222	ProteinID:EER90222	ProteinID:EER90222.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016491
GO:GO:0016722	GO:GO:0030312	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF213	EnsemblPlantsGene:SORBI_3010G230000	SUPFAM:SSF49503	unigene:Sbi.8227
SignalP:SignalP-noTM	UniParc:UPI0001A89660	RefSeq:XP_002438855.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:57273792..57277651

Molecular Weight (calculated)

60701.1 Da

IEP (calculated)

8.725

GRAVY (calculated)

-0.187

Length

546 amino acids

Sequence
(BLAST)

001: MEPPSSPAPL FLVVLFLLGS LLLQARADDP YRFYTWNVTF GDIYPLGVKQ EGILINGQFP GPQIDAVTND NIIVNVFNNL PVPFLLSWQG IQQRRSSWQD
101: GVYGTNCPIP PGGNFTYNMQ FKDQIGTYYY FPSLLFHKAA GGYGGIRVLS RPRIPVPFDP PAGDFTILAG DWFKLNHTDL KGILDSGNDL PLPDGLLING
201: QGWNGNRFTV DQGKTYRFRV SNVGIATSVN IRIQGHSMLL VEVEGSHTMQ STYTSIDIHL GQSYSFLVTA DQPPADYSII ISTRFTTPVL TTTAILHYSN
301: SNGAATVPPP AAPTVEIDFS LNQARSIRWN LTASGPRPNP QGSYHYGLVN TTRTIILANS RATINGKLRY AVNSISFIPA DTPLKVADFY KIPGVFTLGS
401: MPDNPTGGGA YLQTSVMAAN MRDYVEIVFQ NTENFVQSWH IDGYAFWVVG MDGGQWTPAS RQGYNLRDAI ARYTLQVYPQ SWTAIYMPLD NVGMWNVRSE
501: SWARQYLGQQ FYLRVYSPAN SWRDENPIPK NALLCGRASG RRTRPL

Best Arabidopsis Sequence Match ( AT4G22010.1 )
(BLAST)

001: MRGSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA ITNDNIIISV FNYLKEPFLI SWNGVQQRKN SWQDGVVGTT
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F

Arabidopsis Description

sks4At4g22010 [Source:UniProtKB/TrEMBL;Acc:O65449]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.