Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- plastid 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01600.t01 | Wine grape | extracellular, mitochondrion | 82.83 | 66.67 |
| GSMUA_Achr5P26550_001 | Banana | cytosol | 74.75 | 56.92 |
| Solyc05g055720.1.1 | Tomato | nucleus | 40.4 | 44.44 |
| Solyc02g080670.2.1 | Tomato | nucleus | 94.95 | 17.15 |
| Os07t0510900-01 | Rice | extracellular, peroxisome | 69.7 | 14.87 |
| Os06t0678800-01 | Rice | extracellular | 77.78 | 14.21 |
| EER90222 | Sorghum | extracellular | 77.78 | 14.1 |
| TraesCS7D01G447200.1 | Wheat | extracellular | 76.77 | 14.02 |
| TraesCS7B01G359700.1 | Wheat | extracellular | 76.77 | 14.02 |
| HORVU7Hr1G105620.1 | Barley | extracellular | 76.77 | 14.02 |
| TraesCS7A01G459400.1 | Wheat | extracellular | 76.77 | 13.97 |
| Zm00001d014366_P002 | Maize | extracellular | 76.77 | 13.87 |
| Solyc07g052240.2.1 | Tomato | nucleus | 73.74 | 13.44 |
| EER97278 | Sorghum | extracellular, golgi | 70.71 | 12.77 |
| TraesCS2D01G230800.1 | Wheat | extracellular | 68.69 | 12.48 |
| TraesCS2B01G274800.1 | Wheat | vacuole | 68.69 | 12.48 |
| TraesCS2A01G224600.1 | Wheat | extracellular | 68.69 | 12.48 |
| Solyc07g052230.2.1 | Tomato | extracellular | 67.68 | 12.48 |
| Zm00001d021599_P002 | Maize | extracellular, plasma membrane, vacuole | 69.7 | 12.37 |
| Solyc04g082140.2.1 | Tomato | extracellular | 66.67 | 12.22 |
| HORVU2Hr1G047260.1 | Barley | extracellular, golgi, vacuole | 67.68 | 12.16 |
| Solyc12g094460.1.1 | Tomato | extracellular | 66.67 | 12.13 |
| Solyc12g094470.1.1 | Tomato | nucleus | 62.63 | 11.42 |
| Solyc01g111970.2.1 | Tomato | extracellular | 58.59 | 10.82 |
| Solyc02g090360.2.1 | Tomato | extracellular | 55.56 | 10.22 |
| Solyc02g065170.2.1 | Tomato | nucleus | 55.56 | 10.2 |
| Solyc01g005510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 49.49 | 8.8 |
| Solyc04g081520.1.1 | Tomato | extracellular | 46.46 | 8.5 |
| Solyc01g056310.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 46.46 | 8.3 |
| Solyc05g055490.1.1 | Tomato | extracellular | 45.45 | 8.23 |
| Solyc03g063150.2.1 | Tomato | unclear | 44.44 | 7.91 |
| Solyc11g008860.1.1 | Tomato | extracellular | 43.43 | 7.75 |
| Solyc09g055930.2.1 | Tomato | extracellular | 45.45 | 7.71 |
| Solyc08g079090.2.1 | Tomato | extracellular | 43.43 | 7.3 |
| Solyc03g083900.2.1 | Tomato | extracellular | 42.42 | 7.09 |
| Solyc11g008030.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 48.48 | 6.56 |
| GSMUA_Achr5P26560_001 | Banana | extracellular | 2.02 | 0.58 |
| Solyc05g055710.2.1 | Tomato | extracellular | 1.01 | 0.22 |
| Os07t0510833-00 | Rice | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | InterPro:Cu-oxidase_2 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 |
| GO:GO:0055114 | InterPro:IPR008972 | UniProt:K4B9U1 | PFAM:PF07731 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF11 |
| SUPFAM:SSF49503 | EnsemblPlantsGene:Solyc02g080700.1 | EnsemblPlants:Solyc02g080700.1.1 | UniParc:UPI0002769201 | : | : |
Description
No Description!
Coordinates
chr2:+:44865953..44866346
Molecular Weight (calculated)
11600.9 Da
IEP (calculated)
10.348
GRAVY (calculated)
-0.639
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MNSMDSGQWT PANRAHYNLR DTIARCIVQV YPKSWTAIYM ALDNVGMWNI RSENWSRRYL GQQFYLRVHS PANSWRDELP IPKNAILCGK ARGHHTRPL
001: MRGSCKVSIV LLLVLINGVL GDNPYRFFTW KITYGDIYPL GVKQQGILIN GQFPGPHIDA ITNDNIIISV FNYLKEPFLI SWNGVQQRKN SWQDGVVGTT
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F
101: CPIPPGKNFT YVIQVKDQIG SFYYFPSLAF HKAAGAFGAI RVWSRPRIPV PFSPPDGDFW LLAGDWYKTN HYVLRRLLEA GRNLPNPDGV LINGRGWGGN
201: TFTVQPGKTY RFRISNVGVA TSLNFRIQGH TMKLVEVEGS HTVQNIYTSL DIHLGQSYSV LVTANQAPQD YYIVISSRFT RKVLTTTSIL HYSNSRKGVS
301: GPVPNGPTLD IASSLYQART IRRNLTASGP RPNPQGSYHY GLIKPGRTII LANSAPWING KQRYAVNGAS FVAPDTPLKL ADYFKIPGVF NLGSIPTSPS
401: GGNGGYLQSS VMAANFREFI EVVFQNWENS VQSWHVSGYS FFVVGMDGGQ WTPGSRAKYN LRDAVSRSTV QVYPRAWTAI YIALDNVGMW NIRSENWARQ
501: YLGQQFYLRV YTSSTSYRDE YPPPKNALMC GRAKGRHTRP F
Arabidopsis Description
sks4At4g22010 [Source:UniProtKB/TrEMBL;Acc:O65449]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.