Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g05180.t01 | Wine grape | cytosol | 67.64 | 70.48 |
| Solyc07g052230.2.1 | Tomato | extracellular | 48.45 | 49.35 |
| Solyc02g065170.2.1 | Tomato | nucleus | 48.26 | 48.98 |
| Solyc02g090360.2.1 | Tomato | extracellular | 47.71 | 48.51 |
| Solyc07g052240.2.1 | Tomato | nucleus | 47.17 | 47.51 |
| Solyc01g111970.2.1 | Tomato | extracellular | 46.44 | 47.39 |
| Solyc04g081520.1.1 | Tomato | extracellular | 46.25 | 46.77 |
| Solyc02g080670.2.1 | Tomato | nucleus | 46.8 | 46.72 |
| Solyc12g094460.1.1 | Tomato | extracellular | 45.7 | 45.96 |
| Solyc11g008030.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 61.24 | 45.77 |
| Solyc02g080700.1.1 | Tomato | cytosol | 8.23 | 45.45 |
| Solyc09g055930.2.1 | Tomato | extracellular | 48.45 | 45.38 |
| Solyc12g094470.1.1 | Tomato | nucleus | 44.79 | 45.12 |
| Solyc04g082140.2.1 | Tomato | extracellular | 44.42 | 45.0 |
| Solyc03g083900.2.1 | Tomato | extracellular | 44.42 | 41.05 |
| Solyc05g055710.2.1 | Tomato | extracellular | 33.82 | 40.75 |
| Solyc08g079090.2.1 | Tomato | extracellular | 43.69 | 40.58 |
| Solyc11g008860.1.1 | Tomato | extracellular | 40.95 | 40.36 |
| Solyc01g005510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 40.95 | 40.22 |
| Solyc03g063150.2.1 | Tomato | unclear | 40.4 | 39.75 |
| Solyc01g056310.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 39.49 | 38.99 |
| Solyc05g055720.1.1 | Tomato | nucleus | 6.4 | 38.89 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:Cupredoxin |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0016722 | GO:GO:0055114 | InterPro:IPR008972 | UniProt:K4C2M5 | PFAM:PF00394 |
| PFAM:PF07731 | PFAM:PF07732 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF125 | SUPFAM:SSF49503 | EnsemblPlantsGene:Solyc05g055490.1 |
| EnsemblPlants:Solyc05g055490.1.1 | TMHMM:TMhelix | UniParc:UPI000276723D | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5:+:65118592..65121633
Molecular Weight (calculated)
61598.8 Da
IEP (calculated)
5.723
GRAVY (calculated)
-0.139
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLKGFFVF SISFIFVLLN GINCIDIYHE WIVSIDTTIN PLTSHQSVIT INGMFPGPLI NATTNDVVIV NVFNNIDEPL LITWNGIQQR LNSWQDGVSG
101: TNCAIEPGKN WTYVFQVKDQ IGTFTYFPSI NFHKVAGGYG PIRVNNRNVI AVPFPKPEDE FDLLIGDWFR TDYKSLRSSI QDKQSNQFFD IPDAILMNGK
201: RPYDELSSSN NHKSFTVTKG MTYRFRISNV GTVMSFNFRI QNHKMVLVET EGSYTNQITL DSLDVHVGQS YSVLVTADQN EADYYIVATP KMFRSNETLE
301: GIGILHYANS LTTVSGSVPD GPEPFDIAFS VNQAKSITWN LTTGAARPNP QGTFNVSNVT LAQTFILHGS KSEINGWTRY VVNNVSYFTP DTPLKLADMF
401: VNGSGVYQLD QFPTHSVHDS ASYGVSVVSG IHKGWLEIVF INDLDVMDSW HLDGFGFYVV GFGNGDWTPA ARETYNIFDP VVRSTVQIYP GRWTAVYVFL
501: DNPGMWNLRS QHLKNWYLGQ QLFIRVFDDN PNPAKERKPP QNLLLCG
101: TNCAIEPGKN WTYVFQVKDQ IGTFTYFPSI NFHKVAGGYG PIRVNNRNVI AVPFPKPEDE FDLLIGDWFR TDYKSLRSSI QDKQSNQFFD IPDAILMNGK
201: RPYDELSSSN NHKSFTVTKG MTYRFRISNV GTVMSFNFRI QNHKMVLVET EGSYTNQITL DSLDVHVGQS YSVLVTADQN EADYYIVATP KMFRSNETLE
301: GIGILHYANS LTTVSGSVPD GPEPFDIAFS VNQAKSITWN LTTGAARPNP QGTFNVSNVT LAQTFILHGS KSEINGWTRY VVNNVSYFTP DTPLKLADMF
401: VNGSGVYQLD QFPTHSVHDS ASYGVSVVSG IHKGWLEIVF INDLDVMDSW HLDGFGFYVV GFGNGDWTPA ARETYNIFDP VVRSTVQIYP GRWTAVYVFL
501: DNPGMWNLRS QHLKNWYLGQ QLFIRVFDDN PNPAKERKPP QNLLLCG
001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F
Arabidopsis Description
sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.