CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93978	Soybean	extracellular	70.16	70.83
KRH38383	Soybean	cytosol, extracellular, peroxisome	93.97	56.6
KRG92132	Soybean	extracellular	94.6	49.83
KRG92134	Soybean	cytosol, endoplasmic reticulum, extracellular	87.3	45.61
KRH34656	Soybean	extracellular	86.35	45.33
KRH57767	Soybean	cytosol, peroxisome	35.56	31.28
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	66.03	28.42
KRH51639	Soybean	nucleus	47.94	27.61
KRH60965	Soybean	nucleus	47.94	27.61
KRH57764	Soybean	cytosol, extracellular, plastid	37.14	27.53
KRH17495	Soybean	nucleus	47.3	27.24
KRH06000	Soybean	endoplasmic reticulum	46.67	27.17
KRH51114	Soybean	endoplasmic reticulum	46.98	27.06
KRH02049	Soybean	nucleus	46.98	26.96
KRH04707	Soybean	endoplasmic reticulum	46.03	26.8
KRH76937	Soybean	endoplasmic reticulum	45.71	26.67
KRH24127	Soybean	nucleus	46.03	26.65
KRH29100	Soybean	nucleus	46.03	26.51
KRH28523	Soybean	extracellular	45.08	26.44
KRH26769	Soybean	endoplasmic reticulum	44.76	26.31
KRH04708	Soybean	endoplasmic reticulum	44.76	25.92
KRH25361	Soybean	mitochondrion, nucleus	44.13	25.88
KRH56153	Soybean	mitochondrion, nucleus	43.81	25.7
KRG89471	Soybean	mitochondrion	44.13	24.96
KRH50513	Soybean	vacuole	42.86	24.55
KRH11453	Soybean	extracellular	35.24	24.34
KRH50514	Soybean	endoplasmic reticulum, extracellular, vacuole	42.22	24.09
KRH31599	Soybean	extracellular	41.9	23.91
KRH46577	Soybean	mitochondrion	48.25	23.86
KRH56354	Soybean	extracellular	44.76	23.86
KRH04081	Soybean	extracellular	44.76	23.82
KRH62611	Soybean	nucleus	44.76	23.82
KRH57349	Soybean	endoplasmic reticulum	44.44	23.45
KRH57766	Soybean	extracellular	7.62	12.77
KRG99235	Soybean	mitochondrion	2.22	5.6

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EMBL:ACUP02008020	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cupredoxin
EnsemblPlantsGene:GLYMA_13G033600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016722	GO:GO:0055114	InterPro:IPR008972	UniProt:K7LY47
EnsemblPlants:KRH18028	ProteinID:KRH18028	ProteinID:KRH18028.1	PFAM:PF00394	PFAM:PF07731	PANTHER:PTHR11709
PANTHER:PTHR11709:SF125	SUPFAM:SSF49503	UniParc:UPI000294CF1A	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:10575983..10578863

Molecular Weight (calculated)

34960.2 Da

IEP (calculated)

6.077

GRAVY (calculated)

-0.070

Length

315 amino acids

Sequence
(BLAST)

001: MFPGPLINAT TNDNIHVNVF NDLDDPLLFT CFRSSTKLTL YRHGKTYLLR ISNVGTAWSF NFRIQNHQLV LVETKGSYVN QIELESLDVH VGQSYSVLVT
101: ANQNAADYYI VASPKLSNAT NNNTLVGVAV LHYDNSTTPA NGSLPSGPDP FDLQFSINQA KSIRWNLTTG AARPNPQGMF HVTNVTIIET FILNASTTTI
201: DGLSRYSVNN VSFLILDTPL KLADFFSNRT GVYELDAFSK NTSNANAVRG VFVASALHKG WTEIVLENNL DIIDTWHLDV YSFFVVGYNL YVRVYDVDPN
301: PAKEKPPPQN LLLCG

Best Arabidopsis Sequence Match ( AT1G21850.1 )
(BLAST)

001: MEVKSVNTTA MILGLFFLIS FVAAEDPYKF FEWHVTYGNI SPLKVAQQGI LINGKFPGPD IAAVTNDNLI INVFNHLDEP FLISWSGIRN WRNSYQDGVY
101: GTTCPIPPGK NYTYALQVKD QIGSFYYFPS LGFHKAAGGF GAIRISSRPR IPVPFPAPAG DYTVLIGDWY KTNHKDLRAQ LDNGGKLPFP DGILINGRGS
201: GATLNIEPGK TYRLRISNVG LQNSLNFRIQ NHKMKLVEVE GTHTIQTPFS SLDVHVGQSY SVLITADQPA KDYYIVVSSR FTSKILITAG VLHYSNSAGP
301: VSGPIPEAPI QLRWSFDQAR AIKTNLAASG PRPNPQGTYH YGKIKVTRTI KLASSAGNIN GKQRYAVNSA SFYPTDTPLK LADYFKIAGV YNPGSIPDQP
401: THGAIYPVTS VMQTDYKAFV EIVFENWEDI VQTWHLDGYS FFVVGMELGK WSAASRKVYN LNDAVSRCTV QVYPRSWTAI YVSLDNVGMW NLRSELWERQ
501: YLGQQFYMRV YTPSTSLRDE YLIPKNALLC GRATGHHTTT PGPLSEGSER F

Arabidopsis Description

sks8Sks8 [Source:UniProtKB/TrEMBL;Acc:A0A178W9U5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.