Factsheet for Bra039844.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15620.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37232	Canola	plastid	99.01	85.96
AT2G15620.1	Thale cress	plastid	92.31	79.86
Bra015227.1-P	Field mustard	plastid	91.32	78.61
Os02t0765900-00	Rice	cytosol	41.22	75.18
PGSC0003DMT400066399	Potato	cytosol	82.25	71.04
Solyc01g108630.2.1	Tomato	plastid	82.05	70.87
PGSC0003DMT400021310	Potato	plastid	80.87	70.21
Solyc10g050890.1.1	Tomato	plastid	80.47	69.86
KRH71138	Soybean	plastid, vacuole	82.64	69.26
VIT_03s0063g00370.t01	Wine grape	plastid	81.07	69.08
KRH50280	Soybean	plastid	81.85	67.81
EES07578	Sorghum	plastid	77.51	66.27
Zm00001d052165_P001	Maize	plastid	76.33	64.82
Zm00001d052164_P002	Maize	plastid	76.33	64.82
TraesCS6D01G313100.1	Wheat	plastid	76.33	64.82
TraesCS6A01G333900.1	Wheat	plastid	76.13	64.66
GSMUA_Achr9P15320_001	Banana	plastid	77.32	63.84
Zm00001d018161_P001	Maize	plastid	75.94	63.53
Os01t0357100-02	Rice	plastid	75.94	61.4
TraesCS6B01G364600.1	Wheat	plastid	76.13	61.27
HORVU6Hr1G080750.4	Barley	plastid	76.13	58.31
Bra009441.1-P	Field mustard	plastid	23.87	18.7
Bra034128.1-P	Field mustard	plastid	23.47	18.65
Bra001368.1-P	Field mustard	plastid	23.08	18.2

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	EnsemblPlantsGene:Bra039844	EnsemblPlants:Bra039844.1
EnsemblPlants:Bra039844.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	UniProt:M4FFH0	InterPro:NO2/SO3_Rdtase_4Fe4S_dom
InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397
ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014	UniParc:UPI000253EB1F

Description

AT2G15620 (E=3e-286) NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming)

Coordinates

chrScaffold000178:+:197727..199501

Molecular Weight (calculated)

56487.0 Da

IEP (calculated)

5.577

GRAVY (calculated)

-0.322

Length

507 amino acids

Sequence
(BLAST)

001: MKLFMENGIE ELAKKSMEEI DGEKLTKDDI DVRLKWLGLF HRRKHQYGKF MMRLKLPNGV TTSAQTRYLA SVIRKYGEDG CADVTTRQNW QIRGVVLPDV
101: PEILKGLASV GLTSLQSGMD NVRNPVGNPI AGIDPDEIVD TRPYTNLLSQ FITANSLGNP EFSNLPRKWN VCVVGSHDLY EHPHINDLAY MPANKDGRFG
201: FNLLVGGFFS AKRCEEAIPL DAWVPADDVL PLCGAVLEAF RDLGTRGNRQ KTRMMWLIDE LGIEGFRAEV EKRMPSGKLE RESSEDLVNK QWERRDYFGV
301: HPQKQEGLSY IGLHCPVGRL QADDMDELAR LADTYGSGEL RLTVEQNIII PNVETSKTQA LLQEPFLKNR FSPEPSILMK GLVACTGSQF CGQAIIETKL
401: RALKVTEEVE RLVAVPKPVR MHWTGCPNTC GQVQVADIGF MGCLTRGEDG KAVEGADVYV GGRVGSDSHI GEIYKKGVPV TDLAPLVAEI LVKEFGAVPR
501: VREENED

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.