Factsheet for VIT_03s0063g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69481	Canola	mitochondrion	64.2	83.04
Bra039844.1-P	Field mustard	cytosol	69.08	81.07
PGSC0003DMT400021310	Potato	plastid	77.31	78.77
Solyc10g050890.1.1	Tomato	plastid	76.13	77.57
Solyc01g108630.2.1	Tomato	plastid	76.47	77.51
PGSC0003DMT400066399	Potato	cytosol	76.47	77.51
AT2G15620.1	Thale cress	plastid	75.8	76.96
CDX71230	Canola	plastid	75.13	76.28
CDY37232	Canola	plastid	74.79	76.2
CDY36642	Canola	plastid	74.96	76.11
Bra015227.1-P	Field mustard	plastid	75.29	76.06
Os02t0765900-00	Rice	cytosol	35.46	75.9
KRH71138	Soybean	plastid, vacuole	76.47	75.21
CDY72359	Canola	plastid	51.6	74.7
KRH50280	Soybean	plastid	76.64	74.51
GSMUA_Achr9P15320_001	Banana	plastid	75.46	73.13
EES07578	Sorghum	plastid	71.26	71.5
TraesCS6D01G313100.1	Wheat	plastid	70.59	70.35
TraesCS6A01G333900.1	Wheat	plastid	70.08	69.85
Zm00001d052164_P002	Maize	plastid	69.92	69.68
Zm00001d052165_P001	Maize	plastid	69.92	69.68
Zm00001d018161_P001	Maize	plastid	69.92	68.65
Os01t0357100-02	Rice	plastid	70.59	66.99
TraesCS6B01G364600.1	Wheat	plastid	70.42	66.51
HORVU6Hr1G080750.4	Barley	plastid	69.92	62.84
VIT_06s0004g02330.t01	Wine grape	plastid	21.51	18.63

Protein Annotations

KEGG:00920+1.8.1.2	EntrezGene:100253671	wikigene:100253671	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20
ProteinID:AEO72336	ProteinID:AEO72336.1	ProteinID:CCB56864	ProteinID:CCB56864.1	UniProt:F6HQA7	EMBL:FN596006
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	EMBL:JF796046	EntrezGene:LOC100253671	wikigene:LOC100253671
InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460
PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014
UniParc:UPI00015C8DD1	ArrayExpress:VIT_03s0063g00370	EnsemblPlantsGene:VIT_03s0063g00370	EnsemblPlants:VIT_03s0063g00370.t01	unigene:Vvi.13849	SEG:seg

Description

No Description!

Coordinates

chr3:+:3930217..3933793

Molecular Weight (calculated)

66589.9 Da

IEP (calculated)

6.828

GRAVY (calculated)

-0.384

Length

595 amino acids

Sequence
(BLAST)

001: MASISVPFLS QAPTHLSNST SLRLKTRISA TPTPTPTPTT VAPSSTAAVD ASRMEPRVEE RGGYWVLKEK FREGINPQEK VKIEKDPMKL FIEDGFNELA
101: SMSFEEIEKS KHTKDDIDVR LKWLGLFHRR KHQYGRFMMR LKLPNGVTSS AQTRYLASAI RQYGKEGCAD VTTRQNWQIR GVVLPDVPEI LKGLSEVGLT
201: SLQSGMDNVR NPVGNPLAGI DPHEIVDTRP YTNLLSQFIT ANARGNTAFT NLPRKWNVCV VGSHDLYEHP HINDLAYMPA TKKGRFGFNL LVGGFFSPKR
301: CADAIPLDAW IPADDVLPVC QAVLEAYRDL GTRGNRQKTR MMWLIDELGI EQFRAEVVKR MPQQELERSS SEDLVQKQWE RRDYLGVHPQ KQEGFSFVGI
401: HIPVGRVQAD DMDELARLAD EYGSGELRLT VEQNIIIPNV ENSRLEALLK EPLLRDRFSP EPPILMKGLV ACTGNQFCGQ AIIETKARAL KVTEDVGRLV
501: SVTQPVRMHW TGCPNSCGQV QVADIGFMGC MTRDENGNVC EGADVFLGGR IGSDCHLGEV YKKRVPCKDL VPLVAEILVN HFGGVPRERE EEAED

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.