CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71138	Soybean	plastid, vacuole	88.24	89.26
CDY69481	Canola	mitochondrion	63.07	83.91
Bra039844.1-P	Field mustard	cytosol	67.81	81.85
CDX71230	Canola	plastid	74.84	78.16
Os02t0765900-00	Rice	cytosol	35.46	78.06
CDY36642	Canola	plastid	74.67	77.99
Bra015227.1-P	Field mustard	plastid	74.84	77.76
CDY72359	Canola	plastid	52.12	77.62
CDY37232	Canola	plastid	73.86	77.4
AT2G15620.1	Thale cress	plastid	74.02	77.3
Solyc01g108630.2.1	Tomato	plastid	74.02	77.17
PGSC0003DMT400066399	Potato	cytosol	74.02	77.17
PGSC0003DMT400021310	Potato	plastid	73.53	77.05
VIT_03s0063g00370.t01	Wine grape	plastid	74.51	76.64
Solyc10g050890.1.1	Tomato	plastid	72.55	76.03
EES07578	Sorghum	plastid	70.92	73.19
GSMUA_Achr9P15320_001	Banana	plastid	72.88	72.64
Zm00001d052164_P002	Maize	plastid	69.77	71.52
Zm00001d052165_P001	Maize	plastid	69.77	71.52
Zm00001d018161_P001	Maize	plastid	69.93	70.63
TraesCS6A01G333900.1	Wheat	plastid	68.46	70.18
TraesCS6D01G313100.1	Wheat	plastid	68.14	69.85
Os01t0357100-02	Rice	plastid	69.77	68.1
TraesCS6B01G364600.1	Wheat	plastid	68.95	66.98
HORVU6Hr1G080750.4	Barley	plastid	68.3	63.14
KRH29037	Soybean	nucleus	22.22	19.8
KRH24061	Soybean	nucleus	22.22	19.77

Protein Annotations

KEGG:00920+1.8.1.2	EntrezGene:100775519	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	UniProt:A0A0R0JC18
EMBL:ACUP02004679	EnsemblPlantsGene:GLYMA_07G212800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	EnsemblPlants:KRH50280
ProteinID:KRH50280	ProteinID:KRH50280.1	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf
PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0
MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	UniParc:UPI0001D83DCA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:38482410..38485481

Molecular Weight (calculated)

68595.5 Da

IEP (calculated)

7.095

GRAVY (calculated)

-0.362

Length

612 amino acids

Sequence
(BLAST)

001: MSSSFSVRFL APPSSCFPSS RPKTWLCAAT TPTVAPATAS SEVEASRLEP RVEERDGFWV LKEEYRGGIS PQEKVKLEKD PMKLFMEGGI EDLAKMSLEE
101: IESSKHTKDD IDVRLKWLGL FHRRKQHYGR FMMRLKLPNG VTTSAQTRYL ASVIRKYGKD GCADVTTRQN WQIRGVVLPD VPEILKGLDE VGLTSLQSGM
201: DNVRNPVGNP LAGIDPDEIV DTRPYNNLLS QFITANSRGN PAMSNLPRKW NVCVVGSHDL FEHPHINDLA YMPANKDGRF GFNLLVGGFF SAKRCAEAIP
301: LDAWVSADDV IPLCKAVLEA YRDLGFRGNR QKTRMMWLID ELHGLFPLSL SVSAWQVSDK SVWQMKGIEV FRSEVEKRMP GKQLERASEE ELVKKKWERR
401: DYLGVHPQKQ DGLSYVGIHI PVGRVQADDM DELARLVDKY GTGELRLTVE QNIIIPNVDS NKIDALLNEP LLKERFSPEP SLLMKTLVAC TGNQFCGQAI
501: IETKERALKV TEEVERQVAV TRPVRMHWTG CPNTCGQVQV ADIGFMGCMA RDENGKATEG VDIFLGGRIG SDSHLAEVYK KGVPCKNLVP IVVDILVKHF
601: GAVQRNREEG ED

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.