Factsheet for GSMUA_Achr9P15320_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0765900-00	Rice	cytosol	36.48	80.58
CDY69481	Canola	mitochondrion	58.96	78.7
Bra039844.1-P	Field mustard	cytosol	63.84	77.32
EES07578	Sorghum	plastid	73.94	76.56
VIT_03s0063g00370.t01	Wine grape	plastid	73.13	75.46
Zm00001d052165_P001	Maize	plastid	72.8	74.87
Zm00001d052164_P002	Maize	plastid	72.8	74.87
PGSC0003DMT400021310	Potato	plastid	71.01	74.66
PGSC0003DMT400066399	Potato	cytosol	71.34	74.62
AT2G15620.1	Thale cress	plastid	71.17	74.57
CDY37232	Canola	plastid	70.68	74.32
Solyc01g108630.2.1	Tomato	plastid	70.85	74.11
TraesCS6A01G333900.1	Wheat	plastid	71.82	73.87
CDX71230	Canola	plastid	70.36	73.72
KRH71138	Soybean	plastid, vacuole	72.48	73.55
TraesCS6D01G313100.1	Wheat	plastid	71.5	73.53
Zm00001d018161_P001	Maize	plastid	72.48	73.43
CDY36642	Canola	plastid	70.03	73.38
CDY72359	Canola	plastid	49.02	73.24
Solyc10g050890.1.1	Tomato	plastid	69.54	73.12
KRH50280	Soybean	plastid	72.64	72.88
Bra015227.1-P	Field mustard	plastid	69.38	72.33
Os01t0357100-02	Rice	plastid	72.48	70.97
TraesCS6B01G364600.1	Wheat	plastid	71.5	69.68
HORVU6Hr1G080750.4	Barley	plastid	71.01	65.86
GSMUA_Achr6P25020_001	Banana	plastid	22.64	21.79
GSMUA_Achr1P22900_001	Banana	plastid	22.96	20.49

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0010167	GO:GO:0016020	GO:GO:0016491	GO:GO:0020037	GO:GO:0048046	GO:GO:0051536
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr9G15320_001	EnsemblPlants:GSMUA_Achr9P15320_001	EnsemblPlants:GSMUA_Achr9T15320_001	UniProt:M0U0J0	InterPro:NO2/SO3_Rdtase_4Fe4S_dom
InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397
ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014	UniParc:UPI000296AC15
SEG:seg	:	:	:	:	:

Description

Ferredoxin--nitrite reductase, chloroplastic (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G15320_001]

Coordinates

chr9:-:10031291..10034045

Molecular Weight (calculated)

68606.1 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.425

Length

614 amino acids

Sequence
(BLAST)

001: MASSTSLQHF APPARTSPRR ESARRRLTVT AAVTPATEAA TAGVAEERLE PRVEEREGGY WVLKEKYREG INPQEKVKLA KEPMSLVLED GIRELAAKSM
101: EEIDATKVHK DDIDVRLKWL GLFHRRKHQY GRFMMRLKLP NGVTTSEQTR YLASVVEGYG EDGCADVTTR QNWQIRGVTL PDVPAIMQGL GRVGLTSLQS
201: GMDNVRNPVG NPLAGIDPHE IVDTRPYTNL LSAFVTANSR GNPAVTNLPR KWNVCVVGSH DLYEHPHIND LAYMPAMKDG RFGFNLLVGG FFSPKRCAEA
301: VPLDAWVPSD DVIPVCKAIL EAYRDLGTRG NRQKTRMMWL IDELGIEAFR SEVERRMPQE LLERASAEEL VQKEWERRDY LGVHPQKQPG LSFVGLHIPV
401: GRVQASDMFE LARLADEYGS GELRLTVEQN VIIPNVDDAR VEALLDEPLL KERFSPEPPL LMKGLVACTG NQFCGQAIIE TKARAMQVTE EVEKRVSLGR
501: AVRMHWTGCP NTCGQVQVAD IGFMGCMTRD AEGKVCEGAD IYLGGRIGSD SHLGDLHKKA VPCKDLVPVV VDILVEHFGA VRREREEDEE EEQLEQSGKR
601: LDFDDTSKNT AHCH

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.