Factsheet for Os01t0357100-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0765900-00	Rice	cytosol	41.79	94.24
TraesCS6D01G313100.1	Wheat	plastid	81.66	85.76
TraesCS6A01G333900.1	Wheat	plastid	81.18	85.26
EES07578	Sorghum	plastid	79.43	83.98
Zm00001d052164_P002	Maize	plastid	78.63	82.58
Zm00001d052165_P001	Maize	plastid	78.63	82.58
TraesCS6B01G364600.1	Wheat	plastid	82.46	82.06
Zm00001d018161_P001	Maize	plastid	76.87	79.54
CDY69481	Canola	mitochondrion	56.3	76.74
Bra039844.1-P	Field mustard	cytosol	61.4	75.94
HORVU6Hr1G080750.4	Barley	plastid	79.9	75.68
CDY37232	Canola	plastid	67.78	72.77
GSMUA_Achr9P15320_001	Banana	plastid	70.97	72.48
AT2G15620.1	Thale cress	plastid	67.46	72.18
CDY36642	Canola	plastid	67.3	72.01
CDX71230	Canola	plastid	67.15	71.84
PGSC0003DMT400021310	Potato	plastid	66.19	71.06
PGSC0003DMT400066399	Potato	cytosol	66.51	71.04
CDY72359	Canola	plastid	46.41	70.8
Bra015227.1-P	Field mustard	plastid	66.51	70.8
Solyc01g108630.2.1	Tomato	plastid	66.19	70.7
VIT_03s0063g00370.t01	Wine grape	plastid	66.99	70.59
Solyc10g050890.1.1	Tomato	plastid	65.55	70.38
KRH50280	Soybean	plastid	68.1	69.77
KRH71138	Soybean	plastid, vacuole	66.99	69.42
Os02t0765800-00	Rice	peroxisome	3.99	20.49
Os05t0503300-02	Rice	plastid	20.57	20.12

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	EntrezGene:4326014	UniProt:A0A0N7KCY0
ProteinID:BAS72073.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS
InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	EnsemblPlantsGene:Os01g0357100	EnsemblPlants:Os01t0357100-02	PFAM:PF01077	PFAM:PF03460
PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014
UniParc:UPI0000446C49	SEG:seg	:	:	:	:

Description

PROMOTOR OF SHOOT REGENERATION 1Ferredoxin-nitrite reductase, Nitrate reduction (assimilation), Determination of regeneration ability (Os01t0357100-01);Similar to Ferredoxin-nitrite reductase. (Os01t0357100-02)

Coordinates

chr1:+:14447371..14453454

Molecular Weight (calculated)

69677.0 Da

IEP (calculated)

7.289

GRAVY (calculated)

-0.298

Length

627 amino acids

Sequence
(BLAST)

001: MASSASLQRF LPPYPHAAAS RCRPPGVRAR PVQSSTVSAP SSSTPAADEA VSAERLEPRV EQREGRYWVL KEKYRTGLNP QEKVKLGKEP MSLFMEGGIK
101: ELAKMPMEEI EADKLSKEDI DVRLKWLGLF HRRKHQYGRF MMRLKLPNGV TTSEQTRYLA SVIEAYGKEG CADVTTRQNW QIRGVTLPDV PAILDGLNAV
201: GLTSLQSGMD NVRNPVGNPL AGIDPDEIVD TRSYTNLLSS YITSNFQGNP TITNLPRKWN VCVIGSHDLY EHPHINDLAY MPAVKGGKFG FNLLVGGFIS
301: PKRWEEALPL DAWVPGDDII PVCKAVLEAY RDLGTRGNRQ KTRMMWLIDE LVNHFFLHSS TPLTELRMSQ CSYQLIAVLA LQGMEAFRSE VEKRMPNGVL
401: ERAAPEDLID KKWQRRDYLG VHPQKQEGMS YVGLHVPVGR VQAADMFELA RLADEYGSGE LRLTVEQNIV IPNVKNEKVE ALLSEPLLQK FSPQPSLLLK
501: GLVACTGNQF CGQAIIETKQ RALLVTSQVE KLVSVPRAVR MHWTGCPNSC GQVQVADIGF MGCLTKDSAG KIVEAADIFV GGRVGSDSHL AGAYKKSVPC
601: DELAPIVADI LVERFGAVRR EREEDEE

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.