Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- peroxisome 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0765900-00 | Rice | cytosol | 18.85 | 8.27 |
| CDY66993 | Canola | plastid | 19.67 | 4.65 |
| Bra034128.1-P | Field mustard | plastid | 21.31 | 4.08 |
| Os01t0357100-02 | Rice | plastid | 20.49 | 3.99 |
| GSMUA_Achr1P22900_001 | Banana | plastid | 22.13 | 3.92 |
| GSMUA_Achr6P25020_001 | Banana | plastid | 20.49 | 3.92 |
| CDY41362 | Canola | plastid | 20.49 | 3.91 |
| Bra001368.1-P | Field mustard | plastid | 20.49 | 3.89 |
| CDY00681 | Canola | plastid | 20.49 | 3.89 |
| CDX73918 | Canola | plastid | 20.49 | 3.89 |
| AT5G04590.1 | Thale cress | plastid | 19.67 | 3.74 |
| CDY44868 | Canola | plastid | 19.67 | 3.72 |
| CDX70213 | Canola | plastid | 19.67 | 3.71 |
| Bra009441.1-P | Field mustard | plastid | 19.67 | 3.71 |
| KRH29037 | Soybean | nucleus | 20.49 | 3.64 |
| PGSC0003DMT400026666 | Potato | extracellular | 20.49 | 3.62 |
| Solyc11g065620.1.1 | Tomato | plastid | 20.49 | 3.62 |
| VIT_06s0004g02330.t01 | Wine grape | plastid | 19.67 | 3.49 |
| KRH24061 | Soybean | nucleus | 19.67 | 3.49 |
| Os05t0503300-02 | Rice | plastid | 18.03 | 3.43 |
| HORVU6Hr1G071510.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.1050.10 | MapMan:35.2 | EntrezGene:4330834 | ProteinID:BAD17126.1 | ProteinID:BAD17314.1 | ProteinID:BAF10135.1 |
| ProteinID:BAS81061.1 | ProteinID:EAZ24728.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | InterPro:IPR036527 | EnsemblPlantsGene:Os02g0765800 | EnsemblPlants:Os02t0765800-00 | PFAM:PF02036 | PANTHER:PTHR10094 |
| PANTHER:PTHR10094:SF17 | UniProt:Q6Z316 | InterPro:SCP2_sterol-bd_dom | InterPro:SCP2_sterol-bd_dom_sf | SUPFAM:SSF55718 | UniParc:UPI000035AE01 |
| RefSeq:XP_015625053.1 | : | : | : | : | : |
Description
Similar to peroxisomal multifunctional enzyme type 2. (Os02t0765800-00)
Coordinates
chr2:-:32253138..32253801
Molecular Weight (calculated)
13250.2 Da
IEP (calculated)
9.784
GRAVY (calculated)
-0.073
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSNLKSAA LLEQLRVHLA SGAGKELVEK IGFVYQLNIS PKKLAFDEEV FVVDLKKGVV SKGPYEGKPD ATFSFTDDDF LAISSGKLNP QMAFIMGKLK
101: IKGSISAAQK FTPDIFPKPS KL
101: IKGSISAAQK FTPDIFPKPS KL
001: MANTQLKSDA IMDMMKEHLS TDAGKEVTEK IGLVYQINIA PKKLGFEEVT YIVDLKKGEV TKGKYEGGKV DATFSFKDDD FVKVATGKMN PQMAFIRGAM
101: KIKGSLSAAQ KFTPDIFPKP SKL
101: KIKGSLSAAQ KFTPDIFPKP SKL
Arabidopsis Description
ATSCP2SCP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UHV6]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.