CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70213	Canola	plastid	94.88	94.59
AT5G04590.1	Thale cress	plastid	91.01	91.43
CDY00681	Canola	plastid	89.15	89.42
CDX73918	Canola	plastid	88.68	88.96
CDY66993	Canola	plastid	70.39	87.98
CDY41362	Canola	plastid	87.13	87.95
HORVU7Hr1G034450.1	Barley	cytosol	39.84	79.32
HORVU6Hr1G078400.1	Barley	cytosol	23.57	74.88
GSMUA_Achr6P25020_001	Banana	plastid	73.18	73.98
HORVU7Hr1G063980.1	Barley	cytosol	42.95	73.87
HORVU2Hr1G007660.2	Barley	cytosol	42.95	72.32
VIT_06s0004g02330.t01	Wine grape	plastid	76.28	71.62
Zm00001d038625_P001	Maize	plastid	70.39	71.5
Solyc11g065620.1.1	Tomato	plastid	76.59	71.49
PGSC0003DMT400026666	Potato	extracellular	76.59	71.49
TraesCS1A01G323400.1	Wheat	golgi	70.23	71.34
KRH29037	Soybean	nucleus	75.97	71.32
HORVU1Hr1G065770.1	Barley	plastid	69.15	71.25
TraesCS1D01G324200.1	Wheat	plastid	70.23	71.23
EES19776	Sorghum	plastid	70.23	71.11
TraesCS1B01G336300.1	Wheat	plastid	69.92	70.91
KRH24061	Soybean	nucleus	75.5	70.78
Os05t0503300-02	Rice	plastid	69.61	70.05
GSMUA_Achr1P22900_001	Banana	plastid	74.11	69.48
HORVU0Hr1G026700.1	Barley	plastid	70.39	67.86
HORVU6Hr1G071510.2	Barley	cytosol	13.18	59.03
CDY69481	Canola	mitochondrion	17.98	25.22
CDX71230	Canola	plastid	21.24	23.38
CDY36642	Canola	plastid	21.09	23.21
CDY72359	Canola	plastid	14.73	23.11
CDY37232	Canola	plastid	19.84	21.92
Os02t0765800-00	Rice	peroxisome	3.72	19.67

Protein Annotations

KEGG:00920+1.8.1.2	KEGG:00920+1.8.7.1	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	GO:A0A078I6V6
UniProt:A0A078I6V6	EnsemblPlants:CDY44868	ProteinID:CDY44868	ProteinID:CDY44868.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0020037	GO:GO:0050311
GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00080925001	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS
InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365
PANTHER:PTHR11493	PANTHER:PTHR11493:SF58	MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	InterPro:SiR_ferredoxin-dep
TIGRFAMs:TIGR02042	UniPathway:UPA00140	UniParc:UPI0004EB97EB	SEG:seg	:	:

Description

BnaC09g50680DBnaC09g50680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6V6]

Coordinates

chrLK032604:+:161749..164841

Molecular Weight (calculated)

72316.4 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.417

Length

645 amino acids

Sequence
(BLAST)

001: MSSSSSSSFR SPAGAAATLF SSDQKIRLGR LDVLRSSHSA FLGRRNPRGV VSVHPSSSPS PIQAVSSPSK PEAATKRSKV EIIKEKSNFI RYPLNEELLT
101: EAPNVNESAV QLIKFHGSYQ QYNREERGGR SYSFMLRTKN PSGKVPNQLY LTMDDLADEF GIGTLRLTTR QTFQLHGVLK QNLKTVMSSI IRNMGSTLGA
201: CGDLNRNVLA PAAPYVKKDY LFAQETADNI AALLSPQSGF YYDMWVDGEQ FMTAEPPEVV KARNDNSHGT NFVDSPEPIY GTQFLPRKFK VAVTVPTDNS
301: VDLLTNDIGV VVVSDENGEP QGFNLYVGGG MGRTHRMEST FARLAEPLGY VPKEDILYAV KAIVVTQREH GRRDDRKYSR MKYLVSSWGI EKFKDVVEQY
401: YGKKFEPSRD LPEWEFKSYL GWHEQGDGAW FCGLHVDSGR VGGIMKKTLR EVIEKYKIDV RITPNQNIVL CDIKTEWKRP ITTVLAQAGL LQPEFVDPLN
501: QTAMACPAFP LCPLAITEAE RGIPSILKRV RAMFEKVGLE YDESVVIRVT GCPNGCARPY MAELGLVGDG PNSYQVWLGG TPNQTQIARS FMDKVKVHDL
601: EKVFEPLFYH WKVDRQTKES FGEFTTRMGF EKLKELIDTY KGGPQ

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.