CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66993	Canola	plastid	80.59	99.81
Bra034128.1-P	Field mustard	plastid	99.22	99.37
CDX73918	Canola	plastid	93.11	92.53
CDY00681	Canola	plastid	93.11	92.53
CDX70213	Canola	plastid	88.58	87.48
CDY44868	Canola	plastid	87.95	87.13
HORVU7Hr1G034450.1	Barley	cytosol	39.28	77.47
HORVU6Hr1G078400.1	Barley	cytosol	23.63	74.38
GSMUA_Achr6P25020_001	Banana	plastid	73.24	73.35
HORVU7Hr1G063980.1	Barley	cytosol	42.57	72.53
HORVU2Hr1G007660.2	Barley	cytosol	42.88	71.54
VIT_06s0004g02330.t01	Wine grape	plastid	76.84	71.47
KRH29037	Soybean	nucleus	76.84	71.47
Zm00001d038625_P001	Maize	plastid	70.89	71.34
TraesCS1A01G323400.1	Wheat	golgi	70.89	71.34
TraesCS1B01G336300.1	Wheat	plastid	70.89	71.23
TraesCS1D01G324200.1	Wheat	plastid	70.74	71.07
KRH24061	Soybean	nucleus	76.37	70.93
HORVU1Hr1G065770.1	Barley	plastid	69.48	70.93
EES19776	Sorghum	plastid	70.11	70.33
Os05t0503300-02	Rice	plastid	70.11	69.89
PGSC0003DMT400026666	Potato	extracellular	74.96	69.32
Solyc11g065620.1.1	Tomato	plastid	74.96	69.32
GSMUA_Achr1P22900_001	Banana	plastid	72.93	67.73
HORVU0Hr1G026700.1	Barley	plastid	70.89	67.71
HORVU6Hr1G071510.2	Barley	cytosol	13.62	60.42
CDY69481	Canola	mitochondrion	17.68	24.57
CDY72359	Canola	plastid	14.87	23.11
CDX71230	Canola	plastid	20.66	22.53
CDY36642	Canola	plastid	20.5	22.35
CDY37232	Canola	plastid	20.19	22.09
Os02t0765800-00	Rice	peroxisome	3.91	20.49

Protein Annotations

KEGG:00920+1.8.1.2	KEGG:00920+1.8.7.1	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	GO:A0A078HU28
UniProt:A0A078HU28	EnsemblPlants:CDY41362	ProteinID:CDY41362	ProteinID:CDY41362.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0020037	GO:GO:0050311
GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00072923001	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS
InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365
PANTHER:PTHR11493	PANTHER:PTHR11493:SF58	MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	InterPro:SiR_ferredoxin-dep
TIGRFAMs:TIGR02042	UniPathway:UPA00140	UniParc:UPI0004EEC28A	SEG:seg	:	:

Description

BnaA01g31570DBnaA01g31570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU28]

Coordinates

chrLK032495:+:277697..281002

Molecular Weight (calculated)

71518.2 Da

IEP (calculated)

8.234

GRAVY (calculated)

-0.402

Length

639 amino acids

Sequence
(BLAST)

001: MTTSFRSPAG AATVFSSDQK ILNALRSSRS VFLGRNVRGG VHSLPPSSSS SSSIQAVSTP EAAAKATTKR SKVEIIKEKS NFIRYPLNEE LLTEAPNVNE
101: SAVQLIKFHG SYQQYNREER GGRSYSFMLR TKNPSGKVPN QLYLTMDDLA DEFGIGTLRL TTRQTFQLHG VLKHNLKTVM SSIIRNMGST LGACGDLNRN
201: VLAPAAPYAR KDYLFAQETA DNVAALLSPQ SGFYYDMWVD GERFMTAEPP EVVEARNDNS HGTNFVDSPE PIYGTQFLPR KFKIAVTVPT DNSVDLLTND
301: IGLVVVSDDN GEPQGFNIYV GGGMGRTHRM ESTFARIAEP LGYVPKEDIL YAVKAIVVTQ REHGRRDDRK YSRMKYLLSS WGIEKFRDVV EQYYGKKFEA
401: SRDLPEWEFK SYLGWHEQGD GAWFCGLHVD SGRVGGNMKK TLREVIEKYK LDVRITPNQN IVLCDIKSEW KRPITTVLAQ AGLLQPEFVD PLNQTAMACP
501: AFPLCPLAIT EAERGIPSIL KRVRAMFEKV GLDYDESVVV RVTGCPNGCA RPYMAEVGLV GDGPNSYQVW LGGTPNQTQI ARAFMDKVKI HDLEKVFEPL
601: FYNWKLGRQA KESFGEFTTR MGFEKLKELI DSYEGSPNN

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.